Entry |
|
Name |
(GenBank) 2'-5' RNA ligase
|
KO |
|
Organism |
ppul Pandoraea pulmonicola
|
Brite |
KEGG Orthology (KO) [BR:ppul00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:ppul03016]
RO07_08475
Enzymes [BR:ppul01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
RO07_08475
Transfer RNA biogenesis [BR:ppul03016]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
RO07_08475
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(5859112..5859696)
|
AA seq |
194 aa
MRLFLALWPGQGVRAQLHEWAASAHAECGGRVLRAQTLHLTLAFLDEVDPARLPVLFGLM
QRTPLAPFSLTFDHLGYWSDRKIVWAGAPGVPENLMATRDALLSQWRATGARVVTQSFRP
HVTLLRHARRAPADPYPRPLVWHCDGYVLVHSVRTPRGPHYRVLAEHRGTPPEGFFMTPP
QKSTIPASQYGIVG |
NT seq |
585 nt +upstreamnt +downstreamnt
atgcgactcttccttgccttgtggcccgggcagggcgtgcgtgcgcagcttcacgagtgg
gctgcatcggcccatgcggaatgcggcggccgtgtgctgcgcgcccagaccctgcacctg
acgctggcctttctcgacgaagtcgatcccgcccgcctgcccgtgctgttcgggctgatg
caacgcacaccgctcgcacctttctcgctcacgttcgatcatctcggctattggtcggat
cgcaagatcgtctgggcgggcgcacctggcgtgccggagaatctcatggccacccgcgac
gcgctgctctcgcaatggcgcgccaccggcgcccgggtcgtgacgcagtcgttccgtccg
catgtcacgctgctgcgtcatgcgcgtcgcgcaccggccgatccctacccgcggccgctg
gtctggcattgcgacggctatgtgctcgtgcattcggtacgaacgccgcgcgggccgcac
tatcgcgtgctcgccgagcatcgcggtacgcctcccgagggctttttcatgacgccgccc
cagaaatcgacaatccccgcatcgcaatacggtatagtcggatga |