Pandoraea pulmonicola: RO07_08675
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Entry
RO07_08675 CDS
T03553
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppul03000
]
RO07_08675
Transcription factors [BR:
ppul03000
]
Prokaryotic type
Helix-turn-helix
Other families
RO07_08675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
PAS_4
PAS_8
AAA
Mg_chelatase
AAA_2
PAS_7
AAA_3
HTH_29
HTH_23
PAS
AAA_16
IstB_IS21
DUF1932
ATPase
HTH_Tnp_ISL3
RACo_linker
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AJC23172
UniProt:
A0ABM5S5T1
LinkDB
All DBs
Position
complement(52947..54941)
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AA seq
664 aa
AA seq
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MTGTEPPRHAAPLDPRSRRPGIALVSISRLQTLCETVAPRYTDRARFYSVREGYGAAVAA
LQPYVESGAVDVVLAAGSNGAYLRENLSVPVVTVKVNGFDVLSAITRATTTWPDSPLGLV
LHETVSRELDDLGQLLKIQLRQHAYRSVGEVKAAVDTLAAQGCKVIIGPGMACDLAQEVG
LEHVFLYSLGAVEEAFERSVELARVSREKEAKRMRLNTIVAHMRDGVAAFDENGQLEAVN
PAMFSLLGVDEERMATAGERQFELTRKLGPLLRELSEGGVAIEERLAHIDSRPFIVSCVP
IHEHGLRAGAVVTVQDAQMAQRIDRSLRTTQRPRHLVARHELDEFEGASPQIERVKRLAR
AGASHDATVLLTGESGTGKELVAQGIHNASARRGNPFVAFNCAALPEGLIESELFGHDEG
AFTGARRGGKAGLFEIAHTGTIFLDEIGEMPAALQSRLLRVLQEREVMRLGSGRPVPVDV
RVIAATHRDLNALVAEGRFRADLYFRLNLLQIALPALRERRADIRQLARTLLARNAAQYG
LDVRASARILNALAPLFDHYDWPGNVRELENLLARAAIYLDGDVAQQAQALHEVFPELSR
LQGPRHDVQQNKQDATRGTDAPHAPITRAAALAALEAAAGNRAAAARALGISRTTFWRLM
KSTG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
ctgaccggtaccgagccgcctcgccacgccgcgcccctcgatccgcgcagccgccgtccg
ggcattgcgctcgtgagcatcagccgcttgcagacgttgtgcgaaaccgtcgcgccgcgc
tacaccgatcgcgcgcgcttttattccgtgcgcgaggggtatggcgcggccgtcgccgcg
ctgcagccgtacgtggaatcgggtgccgtcgacgtggtgctggccgccggctcgaacggc
gcgtatctgcgtgaaaacctgtccgtgccggtggtcaccgtgaaggtcaatggcttcgac
gtgctcagcgcgatcacgcgcgccacgacgacgtggcccgacagcccgctgggactcgtg
ctccacgaaacggtctcgcgtgagctcgacgatctcggtcagttgctgaagatccagttg
cgtcagcacgcctatcgctccgtgggcgaagtgaaggccgccgtcgatacgctcgcggcg
cagggctgcaaggtcatcatcggcccgggcatggcatgcgatctcgcgcaggaagtgggt
ctggagcacgtcttcctctattcgctcggggcggtggaagaggcgttcgagcgctccgtc
gagctcgcacgggtgagccgcgagaaggaagcgaagcgcatgcgcctgaacaccatcgtc
gcgcacatgcgcgacggcgtcgcggcattcgacgagaacggacaactcgaagctgtgaac
ccggcgatgttctcgctgcttggcgtggacgaagagcgcatggcgacggcaggtgagcgt
cagttcgagctgacgcgaaagctcggtccgttgctgcgcgagttgtccgaaggcggcgtc
gccatcgaggaacgtctggcgcatatcgattcgcgcccattcatcgtgagctgcgtgccg
atccacgagcacggcctgcgcgccggtgcggtcgtcacggtgcaggacgcgcagatggca
cagcgcatcgaccggtcgttgcgcacgacccagcggcccaggcatctcgtcgcgagacac
gaactcgacgagttcgagggcgcctcaccacagatcgagcgcgtgaagcgactcgcccgc
gccggggcctcgcacgatgccacggtgctgctgacgggcgagagcggcacgggcaaggaa
ctcgtcgcacagggcattcacaacgcgagcgcccggcgcggcaatccgttcgtcgcgttc
aactgcgcggcgctgcccgaaggactcatcgaaagcgagctcttcgggcacgacgaaggc
gccttcaccggcgcccggcgcggcggcaaggcgggtctgttcgagatcgcgcatacgggc
acgatcttcctcgacgagatcggcgaaatgcctgccgccttgcaaagccggttgctgcgg
gtgttgcaggagcgggaagtgatgcggctgggctccgggcgtccggtgccggtcgacgtg
cgcgtcattgccgccacgcatcgggacctgaacgcactcgtcgccgaggggcgtttccgc
gccgacctgtatttccgtttaaacctgctgcaaatcgcgttgcccgcgctgcgcgagcga
cgcgccgacatccgtcagttggcgcgcacgctgctcgcgcgcaacgctgcgcaatacggg
ctcgacgtgcgcgcctccgcgcggattctcaacgcgctggcgccgctgttcgaccactat
gactggcccgggaatgtgcgcgagctggagaatctgctggcccgcgccgcgatctatctc
gacggcgacgtggcgcagcaggcgcaggcgctgcacgaggtgtttccggagttatcccgt
ctgcaaggaccgcgtcacgacgtgcagcagaacaaacaggacgcgacgcgcgggaccgat
gcgccgcatgcgccgatcacccgcgcggctgcgctcgccgcgttggaggcggcggcgggc
aatcgcgcggcggcggcccgcgcgctgggtatcagccgcacgacgttctggcgactgatg
aagtcgacgggctga
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