Pandoraea pulmonicola: RO07_09595
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Entry
RO07_09595 CDS
T03553
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppul03000
]
RO07_09595
Transcription factors [BR:
ppul03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RO07_09595
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_28
HTH_AsnC-type
HTH_Tnp_ISL3
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AJC20662
UniProt:
A0AAJ5D0M0
LinkDB
All DBs
Position
270036..271421
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AA seq
461 aa
AA seq
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MSVDTSISLTTASAPSSAPSASSAMSASASARLGCHERGTWSRAPENNDATLLYRKLRGL
RAMVAVLECDSVARAARMLHLSQSAVARSITDIETELGFPLFHRSGRGLIPNAAGQRLGV
RATRALAELANGYREAFAATASHADGGARAASRFAAVVAPQQLTSFIAVAELGSGPLAAS
RLQCSQPTIQRNLDQLEDLIGIKLFRRTPRGTRLTDEALALLGPVKRALAELAIAEDELA
PFGGRQQGTVIVAALPLSSGFLLPKAIDSLLHKSPYLTVTVVDGTYEALVRQLRQADVDM
IVGALRANDVPPDMRQEALFEDHLSVVARADHPCLSLGRSPTLAELAQYGWVSPLPCTPA
RGVFERVFQAEGLSLPQTQVQASSSPVVRGLLSSSDRLALLSPVQITSELRTGELAVVPV
TLQHARRAIGVATRRDGLLSPAAEQLLDELRALAPTMQHPT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgacaccagcatcagtctcaccaccgcgtcagcgccatcgtccgctccgtcc
gcttcgtcggcgatgtcggcatcggcgagcgcgcggctcggttgccacgagcgcggcacg
tggagccgcgcgccagagaacaacgacgccacgctgctgtaccgcaagctgcgcggcctg
cgcgccatggtcgcggtgctcgaatgcgattcggtcgcgcgcgcggcgcgcatgctgcat
ctctcgcagtcggcggttgcgcgctcgatcaccgacatcgagacggagctcggcttcccg
ctctttcaccgcagcggtcgtggcctgattccgaatgcggccggccaacgcctgggcgtg
cgtgcgacgcgtgcgctcgccgagttggccaacggataccgcgaagcgtttgccgccacg
gcgtcgcacgccgacggcggcgcccgggcggcgagccgctttgccgccgtcgtcgcaccg
cagcagctcaccagcttcatcgcggtggcggagcttggcagcggcccgctcgcggcaagc
cgtctgcaatgctcgcagccgacgattcagcgcaacctcgatcaactcgaagacctcatc
ggcatcaagctgttccggcgcacgccgcgcggcacgcgcctgaccgacgaggcgctggcg
ttgctcggtcccgtcaagcgcgcactcgccgaactggcgatcgccgaggacgagctcgcc
ccattcggcggacgtcagcagggcacggtgatcgtggcggcgctgccgctctcgagcggc
tttctcctgcccaaggcgatcgacagcctgctgcacaagtcgccgtatctcacggtcacg
gttgtcgacggcacgtacgaggcgctcgttcgccagttgcgtcaggcggacgtggacatg
atcgtcggtgccctgcgcgccaacgacgtgccgccggacatgcggcaggaggcactgttc
gaagaccatctgtcggtcgtggcgcgcgcggatcacccgtgtctgtcgctgggccgctcg
cccacgctcgccgagctggcgcagtacggctgggtgagtccgctgccgtgcacgcctgcg
cgcggcgtgttcgagcgcgtctttcaggcggaaggtctgtcgttgccgcaaacccaggtg
caagcgagcagttctccggtggtgcgcggtttgctgtcgtcgagcgaccggctcgcgctg
ctctcgccggtgcagatcacttcggagttgcgcacgggcgaactggcggtggtgccggtg
acgctgcagcatgcgcgccgcgccatcggcgtggccacgcgtcgcgatggcctgctctcg
ccggccgcggagcaattgctcgacgagttgcgcgcgctcgcaccgacgatgcagcacccg
acgtaa
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