Pandoraea pulmonicola: RO07_09660
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Entry
RO07_09660 CDS
T03553
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppul03000
]
RO07_09660
03036 Chromosome and associated proteins [BR:
ppul03036
]
RO07_09660
Transcription factors [BR:
ppul03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
RO07_09660
Chromosome and associated proteins [BR:
ppul03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
RO07_09660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TetR_C_6
TetR_C_13
TetR_C_11
HTH_11
TetR
TetR_C_15
GP3_package
HTH_20
fvmX1
TetR_C_24
TetR_C_29
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AJC20671
UniProt:
A0AAJ4ZCN1
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All DBs
Position
282992..283648
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AA seq
218 aa
AA seq
DB search
MQQENSSSGAGYGAADALEAAPAPVKTSRPKPGERRVQVLQTLAAMLETPKGEKITTAAL
AARLDVSEAALYRHFASKAQMFEGLIEFIEQTIFGLINQISAQDQDGVSQARAIVLMLLG
FAEKNPGMTRVLTGEALVGENERLQERMNQLLDRIEASLRQVLRLAAANGTLPETFDANS
RANLLVSYVLGRWHRFAKSGFKRSPAEGAEPQVAALLR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggaaaactcttcgagcggcgccggctacggcgctgccgatgcgctggaggcc
gcacccgcgccggtaaagacaagccgccccaagccgggcgagcgccgcgtgcaggtgttg
cagaccctcgcagccatgctcgagacgcccaagggcgagaagatcaccacggcggcgctt
gccgcacggctcgatgtctcggaggcggcgctctatcgccacttcgcgagcaaggcccag
atgttcgaaggactcatcgagttcatcgagcagaccattttcggcttgatcaaccagatc
tccgcgcaggatcaggacggcgtgtcgcaggcgcgcgccatcgtgctgatgctgctcggt
ttcgccgagaagaaccccggcatgacgcgcgtgctgaccggcgaagcgctcgtcggcgag
aacgagcgcctgcaggagcgcatgaatcagttgctcgaccgcatcgaggcgtcgctgcgc
caggtactgcgcctggcggcggccaacggcacgctgcccgagaccttcgacgccaactcg
cgcgccaacctgctcgtgtcctacgtgctgggccgctggcaccgtttcgccaagagcggc
ttcaagcgctcgccggccgagggggccgaaccgcaggtcgccgcgcttctgcgctga
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