KEGG   Pandoraea pulmonicola: RO07_10255
Entry
RO07_10255        CDS       T03553                                 
Name
(GenBank) alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
ppul  Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:ppul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppul03400]
    RO07_10255
Enzymes [BR:ppul01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     RO07_10255
DNA repair and recombination proteins [BR:ppul03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    RO07_10255
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2
Other DBs
NCBI-ProteinID: AJC20758
UniProt: A0AAJ4ZCH1
LinkDB
Position
complement(418555..419199)
AA seq 214 aa
MTQDLFGHAPGDAAHDTLGPGAFVLRGFARERLPALQTDIDAVIAQAPLRHWLTPGGKRM
SVAMTNCGDVGWISDRMGYRYGTHDPLSKQPWPRMPASFVRLARDAAQTAGYADFAPDAC
LINRYTVDARLTLHQDRDERELGAPIVSVSLGLPAIFLWGGLQRGDRTRKVRLEPGDVVV
WGGESRLVHHGIASVEGSFDADAVRFNLTFRKAR
NT seq 645 nt   +upstreamnt  +downstreamnt
atgacacaggatctcttcggccacgcgcccggcgatgcggcgcacgacacgctcggcccg
ggcgcgttcgtgctgcgcggcttcgcacgcgagcggctgccggcgctgcagaccgacatc
gacgcggtgatcgcgcaagcaccgctgcgtcactggctgacgcccggcggcaagcgcatg
tccgtggcgatgacgaactgcggcgacgtgggctggatcagcgaccggatgggctatcga
tacggtacgcacgacccgctctcgaagcagccatggccgcgcatgccggcgtcgttcgtg
cggctcgcgcgcgacgcggcgcaaacggccggctacgccgacttcgcgccggacgcctgc
ctaatcaatcgctacacggtcgacgcgcgactcacgctgcatcaggatcgcgacgaacgc
gagctcggtgcgcccatcgtatcggtctcgctcggattgccggcgatcttcctctggggc
ggattgcagcgcggcgaccgtacacgcaaagtccggctggagccgggcgacgtcgtggtg
tggggcggcgagtcgcggctcgtccatcacggcattgcgagcgtcgaaggcagcttcgac
gccgacgcggtgcgattcaatctcacgttccgcaaagcgcgctag

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