Pandoraea pulmonicola: RO07_11085
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Entry
RO07_11085 CDS
T03553
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppul03021
]
RO07_11085
Transcription machinery [BR:
ppul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RO07_11085
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma54_CBD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AJC20882
UniProt:
A0AAJ4ZC25
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Position
complement(589237..590175)
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AA seq
312 aa
AA seq
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MSTAATLHPTTPATGTAPTSRALALAPSALMLPGSLGNIDSYIQAVHRIPMLSAEEEQTL
AKRLREHDDLEAARKLVLSHLRLVVSIARNYLGYGLPHADLIQEGNIGLMKAVKRFDPSQ
GVRLVSYAMHWIKAEIHEYVLRNWRTVKVATTKAQRKLFFNLRSQKQGLQAFTPEEIDQV
ARDLNVKREDVIEMETRMSGGDIALEGHGDDSDSASFAPIAYLADTHQEPTAVIAARERD
HLQSDGLQTALARLDSRSRRIIEARWLAVDDDGSGGATLHELAEEFGVSAERIRQIEVAA
MKKMKGALQAYA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttgagtactgccgccacattgcatccgacgacgccggccaccggcacggcgccgacttcg
cgtgcccttgctcttgccccgtcggcattgatgctgccgggcagtctgggcaatatcgac
agctatattcaggctgttcaccgcatccccatgctttccgccgaggaagagcagacgctc
gccaagcgcctgcgggaacacgacgatctcgaagccgcccgcaagctggtgctctcgcac
ctgcgcctggtggtgtcgatcgcgcgtaactacctcggctacggcctgccgcatgccgac
ctgatccaggaaggcaacatcggtctgatgaaggccgtcaagcgcttcgatccctcgcag
ggcgtgcgactcgtgtcgtatgccatgcactggatcaaggccgagattcacgagtacgtg
ctgcgcaactggcgtacggtcaaggttgccacgaccaaggcccagcgcaagctcttcttc
aacctgcgcagccagaagcagggcttgcaggctttcacgccggaagagatcgatcaggtc
gcgcgcgatctgaacgtcaagcgcgaagacgtcatcgagatggaaacgcgcatgtccggc
ggcgacatcgcgctcgaaggtcatggcgacgacagcgacagcgcgagcttcgccccgatc
gcctacctggccgatacgcatcaggaaccgaccgccgtgatcgccgcgcgcgagcgcgac
catctgcaaagcgacggtctgcaaacggcgctcgcccgccttgactcgcgcagccgccgc
atcatcgaagcgcgctggctggcggtcgacgatgacggcagtggcggcgccacgctgcac
gagctggcggaagaattcggcgtgtccgccgaacgtatccgtcagatcgaagtggccgcg
atgaagaagatgaagggcgcgctgcaagcgtatgcctga
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