Pandoraea pulmonicola: RO07_11130
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Entry
RO07_11130 CDS
T03553
Name
(GenBank) nodulation factor ABC transporter ATP-binding protein NodI
KO
K09695
lipooligosaccharide transport system ATP-binding protein
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RO07_11130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppul02000
]
RO07_11130
Transporters [BR:
ppul02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipooligosaccharide transporter
RO07_11130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_22
SMC_N
AAA_23
AAA_30
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AJC20889
LinkDB
All DBs
Position
complement(598836..599753)
Genome browser
AA seq
305 aa
AA seq
DB search
MTAAAIEVTELCKTYDDRPVVDHLSLRVAPGECFGLLGPNGAGKTTTLRMLLGLVTPDAG
DIRLGGMPVPQSAPEARRRIGVVPQFDNLDPDFTVRENLAVFGRYFGLSRAEIRERVPAL
LAFARLEAKADARVGQLSGGMKRRLTLARALINNPDLLVLDEPTTGLDPQARHLIWERLK
SLMNEGKTILLTTHFMEEAERLCHRLCVIDAGRKIAEGTPPELVAREIGCDVVELFGDVP
RALLAQISPLAERIETSGETHFCYVRDAAPLVAALQHQPGVRYLHRRANLEDVFLKLTGR
EMRDE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgccgccatcgaggtaacagagctctgcaagacctatgacgaccgtcccgtc
gtcgatcatctctcccttcgcgtcgcccccggcgagtgtttcggcctgctggggcccaac
ggcgcgggcaagacgaccacgttgcgcatgctgctgggcctggtgacgcccgacgccggc
gacatccggctcggcggcatgcccgtgccgcagtcggcgcccgaggctcggcgacgcatc
ggcgtggtgccgcagttcgacaatctcgatcccgacttcaccgtgcgcgagaaccttgcc
gtcttcggccggtatttcggcctctcgcgcgccgagattcgtgagcgcgtgccggccctg
ctggccttcgcgcggctcgaagccaaggccgacgcccgcgtcggccagctctccggcggc
atgaagcgccgcctcacactcgcccgcgcgctcatcaacaatcccgacctgctcgtactc
gacgagccgaccaccggcctcgatccgcaagcgcggcatctgatctgggaacgtctcaaa
tcgttgatgaacgaaggcaagacgattctgctgacgacgcatttcatggaggaggccgag
cggctgtgccatcgcctgtgcgtgatagatgctgggcgcaagattgccgagggcacaccg
ccagaactcgtcgcacgcgaaatcggttgcgacgtggtggagctcttcggcgacgtgccg
cgggcgttgctcgcacagatctcaccgttggccgagcgcatcgagacgagcggcgagacg
catttctgctacgtgcgcgatgcggcgcctctcgtggccgcgctgcagcaccagcccggc
gtccgctacctccatcgccgcgcgaacctcgaggacgttttcctcaaactcacgggacgg
gagatgcgcgatgaataa
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