Pandoraea pulmonicola: RO07_12645
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Entry
RO07_12645 CDS
T03553
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul00071
Fatty acid degradation
ppul00362
Benzoate degradation
ppul00650
Butanoate metabolism
ppul01100
Metabolic pathways
ppul01120
Microbial metabolism in diverse environments
ppul01200
Carbon metabolism
ppul01212
Fatty acid metabolism
Module
ppul_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RO07_12645
09103 Lipid metabolism
00071 Fatty acid degradation
RO07_12645
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RO07_12645
Enzymes [BR:
ppul01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RO07_12645
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AJC23305
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Position
947683..950067
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AA seq
794 aa
AA seq
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MGAQIAAHLVNAKVPVVLFDLPAKEGPKNGIVTRAIDGLKKLSPAPFADKADAQYIEAAN
YEDDLARLGECDVVIEAIAERMDWKHDLYKKVAPHLAKHAIFASNTSGLSITELSEGFDA
DLKARFCGVHFFNPPRYMHLVELIPTATTEPAILDQLETFLTSTLGKGVVRAKDTPNFIA
NRVGVFSILAVFAEAQKYGIPFDVVDDLTGSKLGRAKSATFRTADVVGLDTMAHVIKTMQ
DGLKDDPFAPTYATPPVLKALVEKGALGQKTGAGFYRKEGKVIKVLDPQSGEYVESGKKA
DEMVVRILKKAPAERLRLLRESTHPQAQFLWAVFRDVFHYIGVYLEQIAENARDVDFAIR
WGFGWSTGPFEDWQAAGWKDIAQWVQEDIDAGKALSNAPLPKWVTSGKVAEAGGVHTAQG
AYAPAKDAFVPRSTLPVYQRQVFPASLVGEAGNDPRKFGKTIEENDAVRVWVDETPGQDD
VLIVSFKSKMNTIGPDVIDGLTRAIDLAEQHYRAVVIWQPTSLQLGAPGGPFSAGADLAA
AMPAFMMGGAKGIEPFIKKFQDGMMRVKYAQVPVVSAVSGIALGGGCELLLHSARRVAAL
ESYIGLVEVGVGLVPGGGGLKEAAIRAAEAAKAADSVQYLQFVTKSFTNAAMAKVSASAL
DAREMGYLKPSDTIVYNVHELLSVARNEARALAVAGYRPPLKPAGIPVAGRSGVSTIKAQ
LVNMRDGNFISAHDFLIASRIAEAVCGGDVEAGSLVNEEWLLALERRAFIDLLGTSKTQE
RIMGMLQTGKPVRN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgcagatcgcggcgcacctcgtcaacgcgaaagtgcccgtcgtgctgttcgat
ctgccggccaaggaaggcccgaagaacggtatcgtcacgcgtgccatcgacggtctgaag
aagctgagccccgcgccgttcgccgacaaggccgacgcgcagtacatcgaagcggccaac
tacgaagacgacctggcccggctgggcgagtgcgacgtggtgatcgaggcgattgccgaa
cgcatggactggaagcacgacctgtacaagaaggtggcgccgcatctggccaagcatgcg
atcttcgcgtcgaacacgtcgggcctgtcgatcaccgaactctcggagggcttcgacgcc
gatctgaaggcgcgcttctgcggcgtgcacttcttcaacccgccgcgctacatgcatctg
gtcgagctgatcccgaccgcgacgaccgagccggccatcctcgatcaactcgaaacgttc
ctcacatccacgctcggcaagggcgtggtgcgcgcgaaggacacgccgaacttcatcgcg
aaccgtgtcggcgtcttttcgattctggcggtgttcgccgaggcgcagaagtacggcatt
ccgttcgacgtcgtcgacgatctgacgggcagcaagctcggccgcgccaagtcggccacg
ttccgcacggccgacgtggtcggcctggatacgatggcgcacgtcatcaagacgatgcag
gacggcctgaaggacgatccgttcgcgccgacgtacgccacgccgcccgtgctcaaggcg
ctggtggagaagggcgccctgggtcagaagacgggcgcgggcttctacaggaaggaaggc
aaggtcatcaaggtgctcgacccgcagtcgggcgagtacgtcgagtcgggcaagaaggcc
gacgagatggtcgtgcgcattctgaagaaggcgccggccgagcgtctgcgtctgctgcgc
gaatcgacccatccgcaggcgcagttcctgtgggccgtgttccgcgacgtgttccactac
atcggcgtgtatctcgagcagattgccgagaatgcacgcgacgtcgacttcgcgattcgc
tggggcttcggctggagcaccggaccgttcgaggactggcaggctgccggctggaaggac
atcgcgcagtgggtgcaggaagacatcgatgcgggcaaggccctgtctaacgcgccgctg
cccaagtgggtcacgagcggcaaggtggccgaagccggtggcgtgcacaccgcgcagggc
gcctacgcgccggcgaaggacgccttcgtgccgcgcagcacgctgcccgtgtatcagcgc
caggtgttcccggcctcgctcgtgggcgaagcgggcaacgacccgcgcaagttcggcaag
accatcgaagagaacgacgccgtgcgcgtgtgggtcgacgagaccccgggccaggacgac
gtgctcatcgtctcgttcaagtcgaagatgaacaccatcgggccggacgtcatcgacggc
ctgacgcgcgccatcgatctggccgagcagcactatcgtgccgtggtcatatggcagccg
acgtcgctgcaactcggcgcgccgggcggtccgttctcggcgggcgccgatctggccgcc
gccatgccggcgttcatgatgggtggcgccaagggcatcgagcccttcatcaagaaattc
caggacggcatgatgcgcgtgaagtatgcgcaggtgccggtcgtctcggccgtgtccggc
attgcgctgggcggtggctgcgaactgctgctccatagtgccaggcgcgtggcggcgctc
gagagctacatcggtctcgtggaagtgggcgtgggcctcgtgccgggcggcggcggtctg
aaggaagcggccattcgcgcggccgaggcggcgaaagccgccgacagcgtgcagtacctc
cagttcgtgacgaagtcgttcaccaacgccgccatggcgaaggtctcggcctcggcgctc
gacgcccgcgagatgggctatctcaagccgtcggacacgatcgtctacaacgtgcacgaa
ctgctgtcggtggctcgcaacgaagcgcgtgccttggcggtggccggatatcgtccgccg
ctcaagccggccggcattccggtggcgggtcgctcgggcgtctcgacgatcaaggcgcag
ctcgtgaacatgcgcgacggcaacttcatctcggcgcacgacttcctgatcgcctcgcgc
atcgccgaagccgtgtgcggcggcgacgtcgaagcaggcagcctcgtgaacgaagagtgg
ctgctggcgctcgagcgtcgcgccttcatcgacctgctgggcacgtcgaagacccaggaa
cgcatcatgggcatgctgcaaaccggcaagccggtgcgcaactaa
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