Pandoraea pulmonicola: RO07_14180
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Entry
RO07_14180 CDS
T03553
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul00362
Benzoate degradation
ppul00624
Polycyclic aromatic hydrocarbon degradation
ppul01100
Metabolic pathways
ppul01120
Microbial metabolism in diverse environments
ppul01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RO07_14180
00624 Polycyclic aromatic hydrocarbon degradation
RO07_14180
Enzymes [BR:
ppul01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
RO07_14180
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
NOMO1-like_2nd
Motif
Other DBs
NCBI-ProteinID:
AJC21346
UniProt:
A0AAJ5CZS9
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Position
1283663..1284373
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AA seq
236 aa
AA seq
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MSNTTTVLRPRDWDSHPKLIDSGYKSTALRGPKQLLVPVRQNLADLRAPVYGHGIVGELD
GDLTRNAVRNGEPLGERMIVTGRVLDEGGRPVPNTLVELWQANACGRYVHKVDQHDAPLD
PNFLGAGRALTDAQGRYRFLTIKPGAYPWRNHHNAWRPQHLHFSVFGQYFATRLVTQMYF
PGDPLLAYDPIFQATPAHARDRLIARFSMDVTEPEYALGYEFDIVLRGADQTPMES
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacacgacaaccgtcctgcgcccccgcgactgggattcgcatcccaagctcatc
gacagcgggtacaagtccacggcgctgcgcggccccaagcaactgctcgtaccggtcagg
cagaatctggccgacctgcgcgcgcccgtgtacggtcacggcatcgtcggagagctcgac
ggcgacctcacgcgcaatgccgtacgcaatggcgagccgctcggcgagcgcatgatcgtc
acgggccgcgtgctcgacgaaggcggtcgtccggtgcccaacacgcttgtggagctgtgg
caggccaacgcctgcggccgctacgtgcacaaggtcgatcagcatgatgccccgctcgac
ccgaactttctcggcgccggccgcgccctgaccgacgcgcagggccgctacagattcctg
accatcaagccgggcgcgtatccgtggcggaaccatcacaacgcgtggcgtccgcagcat
ttgcacttctcggtgttcggccagtacttcgcgacccgcttggtcacgcagatgtacttc
ccgggcgacccgctgcttgcctacgacccgatcttccaggccacgccggcgcatgcgcgc
gaccgcctgatcgcgcgtttctcgatggatgtcaccgagccggagtacgcgctcgggtat
gaattcgacatcgtgctgcgcggtgccgaccaaacgccgatggagtcctga
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