Pandoraea pulmonicola: RO07_15055
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Entry
RO07_15055 CDS
T03553
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppul03032
]
RO07_15055
03400 DNA repair and recombination proteins [BR:
ppul03400
]
RO07_15055
Enzymes [BR:
ppul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RO07_15055
DNA replication proteins [BR:
ppul03032
]
Prokaryotic type
DNA Topoisomerases
RO07_15055
DNA repair and recombination proteins [BR:
ppul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RO07_15055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AJC21474
UniProt:
A0AAJ4ZAF3
LinkDB
All DBs
Position
1468131..1470764
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AA seq
877 aa
AA seq
DB search
MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRALFAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDASVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEVRMAKIGHELLADIDKETVDFGPNYDGSEKEPLILPARIPNLLLNGSSGIAVGMAT
NIPPHNLNEVVEGCLHLLKHPEATVDELIEIIPAPDFPTAGIIYGISGVREGYRTGRGRV
VMRAKTHFEDIDRGQRVAIIVDELPYQVNKRSLLERIAELVNEKRLEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKHTQLQDTFGMNMVALVDGQPKLLNLREMLVHFLAHRRE
VITRRTIYELRRARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKAALMEKSWDSSVV
RDMLARAESETQGGRDAYRPEGLDAAVGMQADGLYRLSETQAQEILQMRLQRLTGLEQDK
IVSEYKEVMAQIADLLDILARPERVTAIIGEELTAVRTEFGDVRRSTIEHNATELDTEDL
ITPQDMVVTLSHSGYIKSMPLSEYRAQKRGGRGKQAAATKDDDWIDTLFIANTHDTILCF
SNRGRVYWIKVYEVPQGSRNSRGRPIVNMFPLQEGEKINVVLPVKEYTEDRFVFMATSLG
TVKKTPLAAFSRPLKKGIIAVNLDEGDVLIGAAITDGAHDVMLFSDAGKAVRFDENDVRP
MGREARGVRGMQLEDGQTVIALLVAENEQQSVLTATENGYGKRTSITEYTRHGRGTKGMI
AIQTSERNGRVVAATLVEPDDEIMLITTGGVLIRTRVSEIREMGRATQGVTLISLDEGTT
LSGLQRIVESDAEVAEATENGGDVLGDDETPEADVTE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggatcagttcgccaaagaaactctcccgatttcgctcgaagaagaaatgcggcggtcg
tatctcgattacgccatgagcgtgatcgtcggccgcgccttgccggacgtgcgcgatggc
ctgaagccagttcaccgccgtgcgctgttcgccatgcacgagctgaacaacgactggaac
cgggcgtacaagaaatcggcgcgtatcgtcggtgacgtcatcggtaaataccacccgcac
ggcgacgcctctgtatacgacaccatcgtgcgcatggcccagccgttctcgctgcgctac
atgctcgtcgacgggcagggcaacttcggttcggtcgacggcgacaacgccgccgccatg
cgatatacggaagtgcgcatggccaagatcggccacgagctgctcgcggacatcgacaag
gaaaccgtcgacttcggtccgaactacgacggcagcgagaaggagccgctgatcctgccc
gctcgtatcccgaacctgctgctcaacggttcgtcggggatcgcggtcggcatggcgacc
aacattccgccgcataacctcaatgaagtcgtcgagggctgcctgcatctgctcaagcat
cccgaagccaccgtcgacgagctcatcgaaatcatcccggcaccggacttcccgacggcc
ggcatcatctacggcatctcgggcgtgcgcgaaggctatcgcaccggccgtggccgtgtg
gtgatgcgagcgaagactcacttcgaggatatcgatcgcggccagcgcgtggcgatcatc
gtcgacgagctgccgtatcaagttaacaagcgctcactgctcgaacggattgcggagctg
gtcaacgagaagcgcttggagggcatttccgacattcgcgacgagtccgacaagagcggc
atgcgcgtggtgatcgagctcaagcgcggcgaagtgccggaggtggtgctcaacaatctg
tacaagcacacccaattgcaggacacgttcggcatgaacatggtggcgctggtcgatggc
cagcccaagctgctgaacctgcgcgagatgctggtgcacttcctcgcgcatcgccgcgaa
gtgattactcgccgcacgatatatgaattgcgtcgcgcccgcgagcgtggccatgtgctc
gaaggtctggcggtagcactcgctaacatcgacgatttcatcgcaatcatcaaggccgcc
ccgacgccaccgatcgcgaaggccgcgttgatggagaagtcgtgggactcgtcggtggtg
cgcgacatgctcgcgcgtgccgagagcgagacgcagggcggtcgcgatgcctatcgtccg
gaagggctcgacgccgcggtcggcatgcaggctgacggtctataccgtctgtccgagacg
caggcgcaggaaatcctgcagatgcgtctgcaacgcctgaccggcctggagcaggacaag
atcgtctccgagtacaaggaagtcatggcgcagatcgccgatctgctcgacatcctggcg
cgtccggagcgcgtcaccgcgatcatcggcgaggaactgaccgccgtgcgcaccgagttt
ggcgatgtccgccgctcgaccatcgaacacaacgccaccgaactcgataccgaagacctg
atcacgccgcaggacatggtcgtgacgctgtcgcactcgggctacatcaagtcgatgccg
ctgtcggaataccgcgcgcagaagcgtggcggtcgcggcaagcaggccgcggcaacgaag
gacgacgactggatcgacacgttgttcatcgccaacacgcacgacacgatcctgtgcttc
tcgaaccgtggccgcgtgtactggatcaaggtctacgaagtaccgcagggttcgcggaac
tcccgcgggcgtccgatcgtcaatatgttcccgttgcaggaaggcgagaagatcaacgtg
gtgctgccggtcaaggagtacacggaagatcgcttcgtgttcatggcaacgagcctgggc
acggtcaagaagacgccgctggcagccttcagccgtccgctcaagaagggcatcatcgcc
gtgaatctcgacgaaggcgacgtgctgatcggcgcggccatcaccgacggagctcacgac
gtcatgctgttctcggatgccggcaaggccgtgcgcttcgacgagaacgacgtacgtccg
atggggcgcgaggcgcgcggcgttcgcggcatgcagctcgaggacggccagacggtcatc
gcgctgctcgtggcggaaaacgagcaacagtcggtgctcacggccacggagaacggctac
ggcaagcgtacgtcgatcaccgaatatacgcgccacggccgtggcactaagggtatgatt
gcgatccagacgagcgagcgcaacggccgggtggtcgcggcgacgctggtcgagccggat
gacgagatcatgctgatcacgaccggcggggtgctgatccgtacgcgagtctccgagatt
cgcgaaatgggccgggccacgcaaggggtgacgttgatcagcctggacgagggtacgacg
ctttcaggtctgcaacgcatcgtcgagtctgatgccgaagtggcggaagccacggagaac
ggcggcgacgtgctgggtgacgacgagacaccggaagcggatgtcacggagtaa
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