Pandoraea pulmonicola: RO07_16610
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Entry
RO07_16610 CDS
T03553
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RO07_16610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
Big_6
Trypsin
Motif
Other DBs
NCBI-ProteinID:
AJC21698
LinkDB
All DBs
Position
1885457..1891276
Genome browser
AA seq
1939 aa
AA seq
DB search
MMTHAQGASEDDTVLEGGVASYLGPDQSVMGPRILSTGADAASLGIVRIFVPWSDGRTDV
VSGVLIDPWWVVTVAHAVDAAAPRRVMGDKSFDASQIERLRAFAPDPLSDSAAPVLVLPA
FDYAATSYQTADVPPYLGDIVALHLSRPFSPPGMTFPKVLWRFYTGLATPLSRYGYGPVF
NEQLFGVSTRDDGFASNPYDGWQARVQGGATDPGNAGAPVFNLDGAVIGIELGFITSNQY
TSLYQSFGPGDQGTATLEGYFVIPLALPTKVVWGGGNSLVWSNYIINHPEQDWSGFGGVG
VAGYRVFYKHASDGDSWARAITKDVPGMTTQLARLDVNPSDTTLWKFTVLPLAWTDASHT
TTSVMGAKSQTEQYPPDGDRGGCTAWGTFAYAFPYALNLSSASANGVVLSWAPTSYIEGH
PDISGYQIFLKPASDGEAWTNAITAWADPGATSTILSPLNADEWTVTILPMVGDTILGAG
PDGLPFPGAQSNMSVRYAPPQVVGQYPNSAGQAFIPLDGAGSISARFANSDIGTTYQWEY
SATPEGAYSSDRDWSHTNGGTHPTLWFGGLAAPGGQAQTSDTGWYRLKATNGLGASYSQP
VHVVIDTSDVPILVDQSPAAGQEILQIDSLPQNSNSHINQIAMVRFSGMQKENNPAYEWQ
TSSSRYEGYTTMGGIPPLQDWFNILLLVGLGPLWVRCKASNSKGSAYSEPFLVVPQKKSS
GVQRCQHPGPFAQVIAPLQRNSANAFLYSAYITSYAATDLIYPPGVYWSRSDTLTGTLSQ
GGEWTSHVYSNDSLLGFLGDGYSGITGAYAFFANDGYGYFPPMYVVAVDGDGSPRVLGGS
ATAGQVRGRAGRVGTAQVVWVFSNMYGVASGYALVPQYPTPGDSNTVVQSAGGFVLTSIG
VSGTPARVGDSRIYVLQAKNVYGTAASDTNLLPLQVTIDPEGVTNWGASNMTSIGLTDVG
SSGTLIIDASNGINTPSSVRATGTFIRVITLPNGLALDSTKPFTWDPWDGGGGEPLATVD
GTGTIVTWGGLSYGGLVEVTDDGTTITLQLIIPDSEQDNWSGTYDYSRAKPISIPVVILS
DAVWGQAVTVQWSVSDGTLSTDPGNFTLWYYLGGAPELTSQAPVGGDTVVAITGSAGALA
ITAHFDTDRSGDTFQWERASSSDGPWSPDMVSPSITGQNTRVLTFGGVSTFDQGWYRLTA
TSWTDEVGYSTPIRVSTNPRTGWQSNPQFLSQVPAGNTSIEIGLGSVGDVSISAFPQAAG
AGSLQWEWSFDGASGSFNSSSHDWSRTTGQNSTTLTFGVAGDNGGVMVADFGWYRLAWNT
GTAAGTVYSNPVQLIPDMDSQGTLGFVSPQAMYYQGTDPIPVFGMASENAVTVTVNGGDY
AFCGVEDGFWEADAFNRDGQYEMVATQESIGAQAFGDSAPARVLFSRGSAPPPQSVAAPV
FTSPQANGNYADPVSITGTGLSGALILLTVNGAAWQTLAVVDGKWDAGSLDWTGEITLTA
TQVFANVYSSPATVTYVLLPDPVFTCPLSGAMYYYNSDNEGSGVAMTGTGAPGATVTVTY
QGKTQGAPATVDKNGRWHAGTFSPPVPPPLDLSYTLNASQTLDSHTSQPVSVTFFLVALL
PPGFTSPVQMPPDFIYENSIAVRGNGLGGAQIMLTLNGEPWGADENPDGVSIGNNTAWDA
GVFWPEDATDYPPSGNAQYAWVLQATEIATNPDGSQVIGPSSNPVFFNCSMVVPPILDMP
TVVFPKTGVQYTGGNGPIWYQGGAGIPVVGGGFTGGTVTVTVDGSVWKENVPIKDGMWNA
GTWNKAGHHDMMVTQSVGNETSAPATLSFDYEPAPGGLPDNLTIIQPKDSENFGTATGLI
YGRGVEEGARLVTVTLNGDYWQTAPISALADVLGGGGPPLLQWMVDGELAKPGIWVLGVT
QTVDDKTSAPTYVAFSIEN
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgcatgctcaaggtgcgagtgaggacgacactgtgctggaggggggcgtagct
agttatttggggccagatcaaagtgttatggggcctcggatcttgtcgactggcgcagac
gccgcaagcttggggatcgttcgcattttcgtgccgtggtcggacggccgcacggatgtg
gtgtcaggtgtcttgatcgatccgtggtgggtggtgacggtggctcacgctgtggatgct
gccgccccacggagggtaatgggtgataagtcatttgatgcgtcacaaattgagaggcta
agggcatttgccccggaccccctatcagattcggcggctcccgtactggtgttaccggca
tttgattacgccgcgacgtcttaccagacggcggacgtgcctccctatctcggcgatata
gtggctttgcacttatcgcgtcctttctcgccaccaggaatgacatttccgaaggtgttg
tggcgtttctacacagggctggcgacgccattgtcgcgttacgggtacgggccggttttc
aacgagcagctctttggagtctcgaccagggatgacggcttcgcatcaaacccctacgat
ggctggcaggccagggtgcaggggggagccacggatccagggaatgcgggggctcctgtg
tttaatctcgatggcgcggtgatcgggattgaacttgggttcattacctcgaatcaatac
acgtcgctgtatcagtcgtttggtcccggcgaccagggcacggcgacgctggagggatat
ttcgtcataccactagcgttgccgacgaaggtggtatggggaggaggtaactcgttggtc
tggagcaattacatcattaaccacccggagcaggactggagtggtttcggtggcgtaggc
gtggcgggatatcgggtgttctataagcacgcttcggacggggactcatgggcacgggcg
atcaccaaagatgtcccgggcatgaccacccaacttgccaggctggatgtgaatccgtct
gatacgacattatggaaattcacggtattgccattggcatggacggatgcttcgcatacc
accacgtctgtgatgggagcgaaaagtcagacggagcagtatccgccggatggcgaccgg
ggaggatgcacagcgtggggaacgtttgcgtatgcatttccctacgcattgaacctgagt
agcgcaagtgccaatggtgtggtgctgtcatgggcgccgacgtcatacattgaaggccac
ccggatatctccgggtaccagatattcctgaaacccgcctcggacggagaggcctggacg
aacgccataacggcatgggcggaccctggcgcaacctccacgattttgtccccgctgaac
gcggatgagtggacggtcacgatcctgccgatggttggtgacacgatcctcggcgctgga
cctgatgggctcccttttcctggcgcccaatccaatatgtcggtccgatacgcaccgccc
caggtggtcggccagtatccgaacagtgctggccaggcgttcataccgctggacggcgcc
ggttcgatttcggcacgcttcgcgaattcggacatcggcaccacatatcaatgggagtat
tcggcgacgccagagggggcgtacagcagtgatcgagattggtctcacaccaacggaggc
actcacccgaccctgtggttcggaggcttggccgctcctggtgggcaggcccagacttcg
gatacgggctggtatcggctgaaggcgacgaacggattgggcgccagctattctcaaccg
gtccatgtggtcatcgatacctcagacgtacccatactggtggatcagtcccctgcggcc
ggacaagaaatcttgcaaattgactcgcttcctcagaatagcaattcccacataaatcaa
attgccatggtgcggtttagtggcatgcagaaggagaacaaccccgcttatgagtggcag
acctcatccagtcgatatgaagggtatacgaccatgggggggatcccgccgctgcaagac
tggttcaatatattgctgctagtgggcctgggcccattatgggttcggtgtaaggcgagt
aatagcaagggctctgcatactcggaacccttcttggtagtccctcagaagaagtcctcc
ggcgtacaacgttgtcagcatccgggcccatttgcgcaagtgatcgccccattacagcgc
aacagtgcgaacgctttcctgtattcggcctatataacgagctatgcggctactgacttg
atttatccacccggcgtgtattggagtcgaagcgatacattgacgggtacgttgagccag
ggcggtgaatggacatcacatgtctattcaaatgattcgctgctcggatttttgggtgat
ggatactcagggatcaccggagcatatgcgttttttgcaaatgacggctacgggtatttc
ccaccgatgtatgtggtggcggtcgatggagacggttctccacgggtgctgggtggttcg
gccaccgcagggcaagtgagaggtcgtgcgggccgcgtaggaacagcgcaggtcgtttgg
gtgttctcgaatatgtacggcgtggccagtggctacgcattggtcccccaatatccgacc
ccaggggattccaatactgttgttcaaagcgctggcggatttgtgttgacgtcgatcggc
gtatccggaactccggcacgggtcggtgattcgcgtatttacgtgcttcaggcaaaaaat
gtatacggtaccgctgcatccgatacgaatctgttgccgctgcaagtgaccattgatcca
gagggggtcaccaattggggcgcatcgaacatgacctcgattgggttgacggatgtgggg
tcgagtgggacgttgataattgatgcgtcgaacggcatcaacacgccgtcaagcgtgcgc
gcgacgggtacatttatccgagtcattaccttgccaaacgggctcgcgctggattcgacg
aaaccgttcacctgggatccgtgggatggcggcggcggagagccgctggcaaccgtggac
gggacaggcacgatagtgacttggggaggtttgtcctacgggggcttggtcgaagtcaca
gacgacggcacgacgatcacattgcaattgatcattcctgacagcgaacaggacaactgg
tcaggcacttacgactattcgcgggcgaaaccgatcagtattccggtggtgatcctctcg
gacgctgtatgggggcaagccgtgacggtgcaatggtcggtgtcggacggtacgctttcg
actgacccaggtaatttcacgctgtggtattaccttggaggtgcgccggaactgaccagc
caggcaccggttggcggagacacggtggtggcaatcaccggctcagcgggcgcattggcg
atcacggcccatttcgacaccgatcgaagtggcgatacgtttcaatgggaacgtgcttca
tcgtcagacggcccatggtcgcccgatatggtctcgcccagcataacggggcagaacacc
cgcgtcctcaccttcggtggagtctcgacatttgatcagggatggtatcgactcaccgcg
accagttggacagacgaggtcggctattccacacccatacgcgtgtcgaccaaccccaga
acgggatggcaaagcaatccgcaattcctgtcccaggtccctgcgggcaacaccagcatt
gagattggcttgggcagcgtaggggatgtgtcgatcagtgcttttccacaagccgcaggc
gcggggtcattgcaatgggagtggtcctttgatggcgcctcagggtcgttcaattccagt
tcgcacgattggtcccgtaccacaggtcagaattcgacgacactgacgttcggggtggcg
ggggacaacggcggcgtcatggtcgcggacttcgggtggtaccgcctggcctggaacacc
ggcaccgctgccggcactgtttattcgaatccggtgcagttgattccggacatggactcg
caagggacgctgggctttgtcagcccgcaagccatgtattaccaaggcacggatccgatt
cccgtatttggaatggcttccgaaaacgccgtcaccgtcacggtgaatggcggcgattat
gctttctgtggggtagaggatgggttctgggaggccgacgccttcaatcgagacggtcaa
tacgaaatggtcgccacccaggagagcatcggcgcgcaagcgtttggagacagcgcgccc
gcgcgggtgttgttcagccgcggtagcgcgccgcccccacagtcggtggcagcaccagta
ttcacctcaccacaagccaatgggaactatgcagatcccgtatcgattaccggcactggc
ttatcaggcgcgctgatcctgctcactgtcaatggcgcagcctggcaaacccttgctgtg
gtggatggtaaatgggacgcagggtcgctggactggacgggagaaattacgctgacggcg
actcaggtgtttgccaatgtgtacagctcgccagcaaccgtgacgtatgttttgctgcca
gaccccgtattcacctgcccgctatcgggagccatgtactactacaacagcgacaacgag
ggttccggcgttgccatgaccggtacaggggcgccgggggcaaccgtgacggttacctac
caaggaaaaacacaaggcgctccagcgactgtggataagaatggcagatggcatgccggc
acattctctccccctgtcccgcccccgctggatttgtcgtacaccttgaatgcgagccaa
accctggacagtcataccagccagccggtgtcggtgaccttctttcttgtcgcgctgctc
ccccccggctttacctcgcccgtccaaatgcctcccgattttatatatgagaactcgatc
gcggtcaggggcaatggtctcggcggcgctcaaatcatgcttaccctgaatggggaaccg
tggggagcggacgagaatccggatggagtctcgataggcaataacacagcctgggatgcc
ggcgttttctggcctgaagatgccactgattatcctccatccggaaatgcgcagtacgcc
tgggtgttgcaggcgacagagatcgccaccaatcctgatggcagtcaagtcataggtcct
tcatcaaatccagtgttttttaactgcagcatggtggtccctcccatcctggatatgccg
acagtggtgtttccaaagacaggcgttcaatacacagggggtaatggcccgatttggtac
cagggtggcgcgggaatcccggtggtgggtggagggttcaccggtggaacggtgacggtc
acggtggatggcagcgtgtggaaggagaatgtcccgatcaaagacgggatgtggaacgcg
ggcacctggaataaagccggacaccacgacatgatggttacccaaagcgttggaaacgag
accagtgcgccagccaccctgtcgttcgattacgagcctgctccaggcgggttacccgac
aatctcaccatcattcagcctaaggatagtgagaatttcggcaccgctacagggcttata
tatggtcgtggagttgaggagggggcacgcctcgttactgtcacgctcaatggcgactat
tggcagactgcacctatcagtgcacttgccgatgtattagggggaggtggtcctccgttg
ttgcaatggatggttgatggtgagttggccaagccggggatctgggtactgggtgtgacg
caaaccgttgatgacaaaaccagtgctcccacttatgtcgccttctccattgaaaactag
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