Pandoraea pulmonicola: RO07_17365
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Entry
RO07_17365 CDS
T03553
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RO07_17365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppul03019
]
RO07_17365
03009 Ribosome biogenesis [BR:
ppul03009
]
RO07_17365
Messenger RNA biogenesis [BR:
ppul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RO07_17365
Ribosome biogenesis [BR:
ppul03009
]
Eukaryotic type
Pre-60S particles
RNases
RO07_17365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CTD1
YjcZ
Motif
Other DBs
NCBI-ProteinID:
AJC23427
UniProt:
A0AAJ4Z9T9
LinkDB
All DBs
Position
2058989..2059630
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AA seq
213 aa
AA seq
DB search
MSAIPSQNSTQAESELTLARAEFNLVWLDMEMTGLQPDTDRIIEVAVVVTDSALTRRIEG
PVFAIHQSDAVLDGMDDWNKSTHGRSGLIDRVKASTVDEASAEAQLIAFLSQYVPPNKSP
MCGNSICQDRRFMARHMPKLEAFFHYRNLDVSTLKELCRRWEPTVYKGFTKRAAHTALAD
IHESIDELVYYREHFLKTSVPGGPDAGAPVVTA
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccattccatcccaaaattccacccaagccgaaagcgaactgacgctcgcacgc
gccgagttcaatctggtctggctcgatatggaaatgacgggtctgcagcccgacaccgac
cggatcatcgaagtggcggtcgtcgtcaccgactccgcgctcacgcgtcgtatcgaaggc
ccggtcttcgccatccatcagtcggacgccgtgctcgacggcatggacgactggaacaaa
tcgacgcacggtcgctcggggctcattgatcgcgtgaaggcgtcgacggtggacgaggcg
tcggccgaagcgcagttgatcgcgtttctgtcccaatacgtaccgcccaacaagtcgccg
atgtgcggcaactcgatctgtcaggatcgccgcttcatggcgcgtcatatgccgaagctc
gaggcgttcttccactatcgcaatctggatgtgagcacgctcaaggagttgtgccgccgt
tgggagccgacggtctacaagggcttcacgaagcgtgctgcccacacggcattggccgat
attcacgagtccatcgacgagctcgtgtattaccgcgagcacttcctcaagacgtccgtg
ccgggtgggcccgacgccggcgcgcccgtcgtgacggcctga
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