Pandoraea pulmonicola: RO07_17480
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Entry
RO07_17480 CDS
T03553
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppul03400
]
RO07_17480
Enzymes [BR:
ppul01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RO07_17480
DNA repair and recombination proteins [BR:
ppul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RO07_17480
Prokaryotic type
RO07_17480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
APD13412
UniProt:
A0AAJ5CZ57
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All DBs
Position
2084668..2086179
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AA seq
503 aa
AA seq
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MSRQSDMNEFRKGLVWLRRDLRCTDNATLAQALVACDEVYVAFVFDTTILDGLPRNDRRV
AFLHDSVSALAKGLEHEGGVLIVRHGDPVTEIPALAKSLGVQMVFAGRDYEPAAVARDRA
VSRSLEAHGMGFALIKDQVIFECNEILTAQGEPYSVFTPYRRAWLKQVSPVDLAPHGRAG
DLKRLAPASRSAGPVPTLAALGFDVPNGRRMTIPAGEAGARRLLDDFLPRMAHYHERRDY
PAVRGPSYLSVHLRFGTISIRTLAREAHAATLRGGDAGSGAQTWLSELIWREFYFMILHH
HPSVVGGAFKPAYDAIEWASGAAADANFEAWREGRTGYPIVDAAMRQMNQTGYMHNRLRM
IAASFLVKDLGIDWRRGEAYFALALNDFDLAANNGGWQWAASTGCDAQPYFRIFNPVTQS
EKFDPQGRFIRKYVPELADLPDKAIHAPWRADAGVLASANVTLGRDYPHPLVAHDVARKE
TLARYAIVKTSGISGKAADVTSD
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccaatctgacatgaacgaattccgtaagggactggtgtggctgcggcgcgat
ttgcgctgcacggacaacgcaacgctggcacaggccttggtggcgtgcgacgaagtgtat
gtcgccttcgtcttcgacacgaccattctcgatgggctgccgcgaaacgaccgtcgtgtg
gcatttcttcacgatagcgtcagcgcgctcgcgaaggggctcgagcacgagggcggtgta
ttgatcgtgcgccatggggacccggtgaccgagattcccgcgctcgcgaaatcgctcggt
gtgcagatggtctttgccggccgcgattacgagccggcggcggttgcgcgcgatcgtgcc
gtgtcacgctcgctcgaggcacacggcatgggttttgcgctgatcaaggatcaggtgatc
ttcgagtgcaacgagatactgacagcgcagggcgagccgtacagcgtattcacgccctat
cggcgcgcgtggctcaagcaggtgagcccggtcgatctcgcgccgcatgggcgggccggg
gacctgaagcggttggctccggcgtcgcgtagtgccgggccggtgccgacgctggcggcg
cttggcttcgatgtccccaacggccgacgcatgacgattcccgcaggcgaggccggagcc
cggcgattgctcgacgattttctgcctcgcatggcgcattaccacgagcgtcgcgattac
ccggcggtgcgggggccgagctatctttccgtccatctgcgattcggcacgatttcgatt
cgcacgctggcgcgcgaagcccacgcggccacgctgcgcggtggcgacgcggggagcggc
gcgcagacgtggttgagcgaactgatctggcgcgagttctacttcatgatcctgcatcat
cacccgtcagtcgtcgggggcgcgttcaagccggcctacgacgccatcgaatgggccagt
ggcgcggcggcggacgcgaatttcgaagcatggcgcgaagggcggacgggctatccgatc
gtggatgccgcgatgcggcagatgaatcagaccggctacatgcacaaccggctgcgcatg
atcgccgcgagttttctcgtgaaggacctcggtatcgactggcgtcgcggcgaggcgtac
tttgcccttgcactcaacgacttcgatctggcggcgaacaatggtggctggcagtgggcg
gcctcgaccggatgcgatgcgcagccctatttccggatattcaatccggtcacccaatcg
gagaagttcgatccgcaagggcgcttcatccggaaatacgttccggaactcgccgacctg
ccggacaaggccatccacgcgccgtggcgtgccgacgccggggtgctggcatcggcgaac
gtgacgctcggacgggattatccgcatccgttggtggcgcacgatgtggcccgcaaggaa
acgctggcgcggtacgcgatcgtgaagacgtccggcatctccggcaaggcggcggacgtc
acttcggattga
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