Pandoraea pulmonicola: RO07_18150
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Entry
RO07_18150 CDS
T03553
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RO07_18150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppul03000
]
RO07_18150
03400 DNA repair and recombination proteins [BR:
ppul03400
]
RO07_18150
Enzymes [BR:
ppul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RO07_18150
Transcription factors [BR:
ppul03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RO07_18150
DNA repair and recombination proteins [BR:
ppul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RO07_18150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HHH
Motif
Other DBs
NCBI-ProteinID:
AJC21927
UniProt:
A0AAJ4Z9A1
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All DBs
Position
complement(2227155..2228642)
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AA seq
495 aa
AA seq
DB search
MNLDPEVCYKAVSARDRRFDGWFFVGVSSTGIYCRPVCNVRTPRFENCSFYGSAAGAEKA
GFRPCLKCRPELAPGVARFDASRELADAAAVMIDEGFLNRASLPALAARIGITERHLRRI
FADEFGVSPIEYAQTQRLLLAKRLLTDTALPVTEVALAAGFGSVRRFNGLFKARYGFAPG
RLRLNARHAALPDGDLVFQLAYRPPFAWHALLDFLGDRAVEGVEQRDGEVYTRTLSVERP
DGQTVSGWCRVTPLNDRHALQVTLPPALANSVPQVLGKLRHLFDLGARPDVIDAHLGPLA
SSTPGLRVPGAVDGFEMAVRAVVGQQITVKGARRLLGRLAQRFGSPLPSPTHGLTHTFPS
AAQMLAVPADALGEAGIIRSRVAAIHGVAQAIVDGRLRLDPLAPLDATVATLLSVKGIGP
WTAQYIAMRALGSPDAMPADDLVLRQALGAPDGRAVAARAARWAPWRAYAALHIWRAAAQ
GPAGQPVETLQEICA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgatcccgaagtctgctacaaagcggtctccgcccgtgaccggcgcttcgat
ggctggtttttcgtcggcgtctcgtccaccggtatctactgccggccggtctgcaatgtg
cgcacgccccgcttcgagaactgctcgttctacggcagcgccgccggcgccgaaaaggcc
ggcttccggccctgcctaaaatgccgcccggaactcgcccccggcgtcgcacgcttcgac
gccagccgcgaactcgccgacgccgccgccgtcatgatcgacgaaggcttcctgaaccgc
gccagcctgccagccctcgccgctcgcatcggtatcacggagcgccacctgcgccggatc
ttcgccgacgaattcggcgtctcgcccatcgagtacgcccagacgcaacggctgctgctc
gccaagcgcctgctcaccgacaccgccctgcccgtgacggaagtcgctctcgccgccggc
ttcggcagcgtgcgccgcttcaacggcctgttcaaggcccgctacggcttcgcccccgga
cgcctgcgtctgaacgcgcgccacgccgcgctacccgacggcgacctggtcttccagctc
gcctatcgccctcccttcgcctggcacgccctgctcgattttctgggcgaccgggccgtc
gaaggcgtggagcaacgcgacggcgaggtctacacacgcacgctcagcgtcgaacgcccg
gatggacagacggtctcgggctggtgccgcgtcacgccgctgaacgaccggcacgccctg
caggtgacgctgccccccgcacttgcgaacagcgtgccgcaagtgctcggcaagcttcgc
cacctgttcgatctcggtgcgcgcccggatgtcatcgacgcccacctcggcccgctcgcc
tcgagcaccccgggcctgcgcgtgccgggcgccgtggacggtttcgagatggccgtgcgc
gccgtcgtcggccagcaaatcaccgtcaagggcgcccggcgtctactcgggcgcctcgcc
cagcgattcggctcgccactcccgtcgcccacgcacggactcacgcatacgttcccgagc
gccgcccagatgctcgccgttcccgccgacgcgctcggcgaagccggtatcatccgtagt
cgtgtcgccgccattcacggcgtcgcgcaggcaatcgtggacggccggctgcgtctggat
ccgctcgcgccgctggacgcgacggtagctacactgctctcggtcaagggcatcgggcca
tggacggcacagtacatcgcgatgcgcgccctcggctcgcccgacgcgatgcccgccgac
gacctggtgctccgtcaggcgctgggggcgccggacggccgcgcagtggccgcacgcgcg
gcgcgctgggcaccctggcgcgcctacgcggcgctgcatatctggcgcgcggcggcgcag
ggaccggcaggccagccggtcgagaccttgcaggagatttgtgcatga
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