Pandoraea pulmonicola: RO07_18515
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Entry
RO07_18515 CDS
T03553
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul03030
DNA replication
ppul03430
Mismatch repair
ppul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RO07_18515
03430 Mismatch repair
RO07_18515
03440 Homologous recombination
RO07_18515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppul03032
]
RO07_18515
03400 DNA repair and recombination proteins [BR:
ppul03400
]
RO07_18515
Enzymes [BR:
ppul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RO07_18515
DNA replication proteins [BR:
ppul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RO07_18515
DNA repair and recombination proteins [BR:
ppul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RO07_18515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
AAA_18
AAA_30
DUF3646
AAA_2
TsaE
nSTAND3
AAA_19
AAA_28
PIF1
AAA_assoc_2
RsgA_GTPase
Mg_chelatase
Herpes_Helicase
Glyco_tranf_2_5
SKI
Rad17
Motif
Other DBs
NCBI-ProteinID:
AJC23460
LinkDB
All DBs
Position
2309970..2311877
Genome browser
AA seq
635 aa
AA seq
DB search
MTYQVLARKWRPKGFSTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK
ALNCETGITAEPCGVCKACRAIDEGRFVDYVEMDAASNRGVDEMTSLLEKAVYAPADARF
KVYMIDEVHMLTGHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLTNILGEEGIENEPQALRLLAKAAGGSMRDALSLTDQAIAYAAGPLTESAVRGM
LGAIDQSVLVRLLDALKDESRADLLAIADEMAERSFSFAAGLQDLGSLLHKIALAQFAPQ
AVSDDWPEAADVRRLAEVFSPEAVQLYYQIATRARGELGLAPDEYTGFSMALLRMAAFTP
LLAGGMLAEPPTPHAVGGRPTVAAAPARAPMGEPMRSAPQAGAPHSPAASAAPAAQPEAR
RAPAARSSAPTDGAPMSPARAALAALNAGRKGAGGRTSGGATPAARGGAARASDDAPAGA
DPEPEPARPAAPAPEPAPRACVYREAEGVAPVFTGEWPALAAELSARGLAQQLAFQSELT
EVAGRALHLRVPLRQLADAATVDKLRQVLTEHFGADVQLHVEVGQVGTTAASLAAEAAAA
RQRAAEQAIADDPLVRELIEEFDAQILPNSIRPVQ
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagtactcgcgcgcaaatggcgccccaaaggcttctcgaccctggtgggc
caggagcatgtcgtgcgtgcgttgacgcacgcgctcgagcaacagcgtctgcatcacgcc
tatttgtttaccggtacgcgcggcgtcggcaagaccacgctctcgcgtattctggccaag
gcgctcaattgcgagacgggcatcaccgccgagccgtgcggcgtgtgcaaggcgtgccgt
gccatcgatgagggccgtttcgtcgactatgtcgaaatggacgcggcctcgaaccgcggc
gtcgacgagatgacgtcgctgctggaaaaggcggtctacgctccggcggacgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctcaccgggcatgcgttcaacgcgatgctc
aaaacgctcgaagagccgcccgctcacgtcaaattcatcctggcgacgaccgatccgcag
aaaattcccgtcaccgtgctctcgcgctgcctgcagttcaatctaaagcagatgccggcg
gggcatatcgtgtcgcatctgacgaatattctcggcgaggagggtatcgagaacgaaccg
caggcgctgcgcctgctcgccaaggcggcgggcggcagcatgcgcgatgcgttgtcgctc
accgaccaggccattgcgtatgctgccgggccgctgaccgagtcggccgtgcgcggcatg
ctcggggcgatcgaccagagcgtgctcgtgcgcctgctcgacgccctcaaggacgagtcc
cgcgccgatctgctggcgattgccgacgaaatggccgagcgcagcttttcgttcgcggcc
ggcttgcaggatctcggcagcctgctccacaagattgcgctggcgcagttcgcgccgcag
gcggtctccgacgactggccggaagctgccgacgtgcgccgtctggccgaagtcttctcg
ccggaagccgttcagctctattaccagatcgccacgcgtgcgcgcggcgaactcggcctc
gcgccggacgaatacaccggcttttcgatggccttgctgcgcatggcagcgttcacgcca
ttgctggccggcggcatgctcgccgagcctccgacgccgcacgccgtgggaggccgcccg
acggtggcggccgccccggcgcgggcgccgatgggcgagccgatgcgctcggcgccgcag
gcaggcgcaccgcattcccctgccgcatccgcggcgcccgccgcccagccggaggcccgg
cgtgcgccggcggcgcgcagcagcgcaccgaccgacggcgcgccgatgtcacccgcgcga
gcggcgctcgctgcgctcaacgcggggcgcaagggcgcaggcgggcggacttccggtggt
gcgacgccagccgcgcggggtggtgccgctcgcgcgtcggacgacgctcccgcgggcgcc
gacccggagcccgagcctgccagacctgcggcgcccgcacccgagccggcgcctcgcgcc
tgcgtctatcgtgaagccgagggggtggcgcccgtctttacgggcgagtggcccgctctg
gctgccgagttgtccgcacgcggcctggctcagcaactggcattccagagcgaattgacc
gaagtcgccggtcgcgcgctgcatctgcgtgtgccgctgcgtcaactggccgacgccgcc
acggtcgacaagcttcgccaggtgctgacggagcacttcggcgctgacgtgcagttgcac
gtcgaagtagggcaggtgggcaccacggccgcgtcgctggcggccgaagcggcggcagcc
cgtcagcgggcggccgaacaggccatcgccgacgatccgctcgtgcgcgagctgatcgag
gaattcgacgcgcagatcctgcccaacagcattcgcccggtacaataa
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