Pandoraea pulmonicola: RO07_19380
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Entry
RO07_19380 CDS
T03553
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppul03016
]
RO07_19380
Enzymes [BR:
ppul01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RO07_19380
Transfer RNA biogenesis [BR:
ppul03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RO07_19380
Prokaryotic type
RO07_19380
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AJC22111
UniProt:
A0AAJ5CYT5
LinkDB
All DBs
Position
2497857..2498843
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AA seq
328 aa
AA seq
DB search
MTDPRSQASRQKLPRFALDGVLLLDKPLGLSSNDALIKAKRLLQALKAGHTGTLDPLATG
LLPLCFGEATKFSQDLLEADKTYEAHVRLGETTTTGDAEGEVLQTRPVTVDEVAIRAVLP
RFTGSISQVPPMYSALKRDGKPLYEYARAGQTLEREARQVTILSLELVTCSLPEVAEFTF
RVTCSKGTYVRTLAEDIGEALGCGAHLRGLRRTAVGPLTLEGAITLEALNALDHAQRVEK
LAPVDALLKTLPTVWLDETLAKRFSHGQRLRLDDTRCPQPLRACASTHGAIEVKVYAEAA
GDVGSRLLGVARLDGEALLTPQRLLKTQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacggacccgcgttcgcaggcatcccgccagaaactcccccgctttgccctcgacggc
gtgctgttgctcgacaagccgctaggcctgtcgtccaacgatgcgctcatcaaggcgaag
cgcttgctccaggcgttgaaggcgggacatacgggcacgctcgatcccctggccaccggg
ttgctgccgttgtgcttcggcgaagcgacgaagttctcgcaggacctgctcgaagcggac
aagacatacgaagcgcatgtccgtcttggtgagacgaccacgacgggcgatgcggaaggc
gaggtgctgcaaacgcgtccggtgacggtggacgaggtggcgattcgcgccgtgctgccg
cgctttaccggttcgatttcgcaggtgccgccgatgtactcggcgctcaagcgcgatggc
aagccgctctacgaatatgcgcgtgcggggcagacgctggagcgcgaggcgcgtcaggtc
acgatcctgtcgctcgagttggtgacgtgctcgttgccggaggtcgccgaattcacgttc
cgcgtgacgtgcagcaaggggacctacgtgcgcacgctggcggaagacatcggcgaggcg
ctgggctgtggtgcgcatctgcgtggcctgcgccgcacggcggtggggccgctcacgctc
gaaggcgcgatcacgcttgaagcgctgaacgcccttgaccacgcgcaacgcgtggaaaag
ctcgcgcccgtggacgcgttgctcaagaccttgccgaccgtctggctcgacgagacgctg
gcgaagcgcttcagtcacgggcagcgcttgcgcctggacgacactcgttgccctcagccg
ctccgcgcttgtgcgtcgacgcacggcgcgatcgaggtcaaggtctacgccgaggcggcg
ggcgacgtcggtagccggttgctcggcgtcgcgcggctcgacggggaagcgctacttacg
ccgcagcgcttgctcaagacccaatag
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