Pandoraea pulmonicola: RO07_20005
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Entry
RO07_20005 CDS
T03553
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul03030
DNA replication
ppul03430
Mismatch repair
ppul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RO07_20005
03430 Mismatch repair
RO07_20005
03440 Homologous recombination
RO07_20005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppul03032
]
RO07_20005
03400 DNA repair and recombination proteins [BR:
ppul03400
]
RO07_20005
Enzymes [BR:
ppul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RO07_20005
DNA replication proteins [BR:
ppul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RO07_20005
DNA repair and recombination proteins [BR:
ppul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RO07_20005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Peripla_BP_3
RNase_H_2
Vinculin
Motif
Other DBs
NCBI-ProteinID:
AJC23500
UniProt:
A0ABM5S6U2
LinkDB
All DBs
Position
complement(2639210..2639824)
Genome browser
AA seq
204 aa
AA seq
DB search
MQTVAVLDFETTGLSPTQGDRATEIAVVLLRDGKIVDRYQSLMNAGRRIPSDVAALTGIT
NDMIAAAPSVSKVMREAAEFVGACPVVAHNAGFDKRFWQAELALLGMKADHAFACTMLAS
RRIYPHAQNHRLSSLAQMLCLPQTGRAHRAMVDAEMTTHLWHRLQNDIGRTYGLGHVDHA
LISRVQTTSKDKVPMMLRALAQGR
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccgtagcagtcctcgactttgaaaccaccggcctgtcgccaacgcaaggcgat
cgggcgacggaaattgccgtcgtccttttgcgtgacgggaagatcgtcgatcgctatcag
agcctgatgaacgccggcaggcggattccgtcggacgtcgccgcgctgacgggcatcacg
aatgacatgatcgccgcggcgccgtcggtatccaaggtgatgcgcgaagctgcggagttt
gtcggggcgtgtccggtggtcgcgcacaatgccgggttcgacaagcggttctggcaggcc
gaattggcgttgctcggcatgaaggccgaccacgcgtttgcgtgcaccatgctggcgtca
cggcgcatctacccgcacgcccagaaccaccggctctccagtctggcgcagatgctatgc
ctgccgcaaaccggccgcgctcaccgggcgatggtcgatgcggaaatgacgacgcatctc
tggcatcgtctgcagaacgacatcgggcggacgtacggcctggggcacgtggatcatgcg
ctgatctcgcgtgtgcagacgacgagcaaggataaggtgccgatgatgctgcgtgcactg
gcgcagggacggtag
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