KEGG   Pandoraea pulmonicola: RO07_20220
Entry
RO07_20220        CDS       T03553                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
ppul  Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:ppul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppul03032]
    RO07_20220
   03036 Chromosome and associated proteins [BR:ppul03036]
    RO07_20220
   03400 DNA repair and recombination proteins [BR:ppul03400]
    RO07_20220
DNA replication proteins [BR:ppul03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    RO07_20220
Chromosome and associated proteins [BR:ppul03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    RO07_20220
DNA repair and recombination proteins [BR:ppul03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      RO07_20220
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF2267
Other DBs
NCBI-ProteinID: AJC22239
UniProt: A0AAJ4Z8H3
LinkDB
Position
complement(2687829..2688107)
AA seq 92 aa
MNKQELIDAVAGATGASKANTGETIDAVLEVIKKAVAKGDAVQLIGFGSFGSGKRAARTG
RNPKTGEAIKIPAAKTVKFTAGKAFKDAVNKK
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaacaggaactgatcgacgccgtcgccggcgctacgggcgcatccaaagcaaac
actggcgaaaccatcgacgctgtgctcgaggtcatcaagaaggctgtcgccaagggtgat
gcggttcagttgatcggctttggctcgttcggttcgggcaagcgtgctgcgcgtaccggc
cgcaacccgaagaccggcgaagcgatcaagatccccgcagccaagaccgtgaagttcacg
gctggcaaggcgttcaaggacgccgtcaacaagaagtaa

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