Pandoraea pulmonicola: RO07_20220
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Entry
RO07_20220 CDS
T03553
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppul03032
]
RO07_20220
03036 Chromosome and associated proteins [BR:
ppul03036
]
RO07_20220
03400 DNA repair and recombination proteins [BR:
ppul03400
]
RO07_20220
DNA replication proteins [BR:
ppul03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RO07_20220
Chromosome and associated proteins [BR:
ppul03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RO07_20220
DNA repair and recombination proteins [BR:
ppul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RO07_20220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AJC22239
UniProt:
A0AAJ4Z8H3
LinkDB
All DBs
Position
complement(2687829..2688107)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKQELIDAVAGATGASKANTGETIDAVLEVIKKAVAKGDAVQLIGFGSFGSGKRAARTG
RNPKTGEAIKIPAAKTVKFTAGKAFKDAVNKK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaggaactgatcgacgccgtcgccggcgctacgggcgcatccaaagcaaac
actggcgaaaccatcgacgctgtgctcgaggtcatcaagaaggctgtcgccaagggtgat
gcggttcagttgatcggctttggctcgttcggttcgggcaagcgtgctgcgcgtaccggc
cgcaacccgaagaccggcgaagcgatcaagatccccgcagccaagaccgtgaagttcacg
gctggcaaggcgttcaaggacgccgtcaacaagaagtaa
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