Pandoraea pulmonicola: RO07_22915
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Entry
RO07_22915 CDS
T03553
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppul03009
]
RO07_22915 (rimO)
Enzymes [BR:
ppul01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RO07_22915 (rimO)
Ribosome biogenesis [BR:
ppul03009
]
Prokaryotic type
ribosomal protein modification factors
RO07_22915 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AJC22610
UniProt:
A0AAJ4ZH18
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All DBs
Position
complement(3409668..3411035)
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AA seq
455 aa
AA seq
DB search
MSRSSPAGTPKVGFVSLGCPKALVDSEQILTQLRAEGYDIAGTYDGADLVVVNTCGFIDD
AVQESLDAIGEALAENGKVIVTGCLGAKKDAAGQDIVSAVHPKVLAVTGPHAVGEVMSAV
HTHLPKPHDPFTDLVPPAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPVAEV
MLEAENLFKAGVKELLVISQDTSAYGVDVKYRTGFWAGRPLKTRMTELVGALGELARQYG
AWVRLHYVYPYPHVDEIIPLMAEGHILPYLDVPLQHAHPDVLKRMKRPASGEKNLERIQA
WRKLCPDLTIRSTFIAGFPGETEAEFEYLLDFLREAELDRVGCFAYSPVEGAKANELPGA
LPDEVREERRARFMEVAEEISAERQQRKVGQTIQVIVDEINQDGGVARSAADAPEIDGLV
YIEPTAKAAKRLKVGEFVNVTVTGADGHDLWGEVV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctcatcgcccgccggcacccccaaggtcggtttcgtttcgctcggctgcccg
aaggccctggtcgattccgagcaaatcctgacccaattgcgcgccgaaggctacgacatt
gccggcacctatgacggcgccgaccttgtcgtggtcaatacctgcggcttcatcgacgac
gccgttcaggaaagcctcgacgccatcggcgaagcgctggccgaaaacggcaaggtcatc
gtcaccggttgtctcggcgccaagaaggacgccgccgggcaggacatcgtgagcgccgtg
cacccgaaggtgctcgccgtcaccggcccgcacgccgtgggcgaagtgatgagtgccgtg
cacacgcacctgcccaagcctcacgatccgtttaccgatctcgtgccgccggccgggatc
aagctcacgccacgtcactatgcctatctgaagatttcggaaggctgcaatcaccgctgc
acgttctgcatcatcccgtcgatgcgcggcgacctcgattcgcgcccggtggccgaagtg
atgctcgaggcggagaacctgttcaaggcgggcgtgaaggaactgctggtgatctcgcag
gacaccagcgcttacggcgtggacgtgaagtatcgcaccggcttctgggcgggccgtccg
ctcaagacccgcatgacggaactggtgggcgcgctgggcgagttggccaggcagtacggt
gcgtgggtgcgcctgcactacgtctatccgtatccgcacgtcgacgagatcattccgctg
atggccgagggccatatcctcccgtatctcgatgtgccgctgcagcacgcgcaccccgat
gttctcaagcgcatgaagcgcccggcctcgggcgagaagaacctcgagcgcatccaggca
tggcgcaagctgtgcccggacctgacgattcgcagcacgttcatcgccggcttccccggc
gagaccgaagccgagttcgaatacctgctggacttcctgcgcgaggcggaactcgatcgc
gtgggctgtttcgcctactcgccggtcgaaggcgcgaaggccaacgaactgccgggcgcg
ttgcccgacgaagtgcgcgaagaacgccgcgcacgcttcatggaagtggccgaggagatt
tcggccgagcgccagcagcgcaaggtcggtcagacgatccaggtgatcgtcgacgagatc
aatcaggacggcggcgttgcccgttcggcagcggacgccccggaaatcgacggtctggtg
tacatcgaaccgacggccaaggcagccaagcgcctgaaggtcggcgagttcgtgaacgtg
acggtcaccggcgccgacggccacgacctgtggggcgaagtggtctga
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