Pandoraea pulmonicola: RO07_23615
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Entry
RO07_23615 CDS
T03553
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppul
Pandoraea pulmonicola
Pathway
ppul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RO07_23615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppul03019
]
RO07_23615
03016 Transfer RNA biogenesis [BR:
ppul03016
]
RO07_23615
Enzymes [BR:
ppul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RO07_23615
Messenger RNA biogenesis [BR:
ppul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RO07_23615
Transfer RNA biogenesis [BR:
ppul03016
]
Prokaryotic type
tRNA degradation factors
RO07_23615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH_KhpA-B
S1_TP0910
KH-I_KHDC4-BBP
DUF5813
Motif
Other DBs
NCBI-ProteinID:
AJC22707
UniProt:
A0ABN4ET50
LinkDB
All DBs
Position
complement(3557789..3559930)
Genome browser
AA seq
713 aa
AA seq
DB search
MQMFNKVVKSFQWGQNTVRMETGEIARQASGAVLVDMDDTVVLATVVGAKNAKPGQDFFP
LTVDYLEKTYAAGKIPGGFFKREGRPSENETLTSRLIDRPIRPLFPEGFYNEVQVVVQVV
SLNPDVPADIPALIGASAALAVSGLPFNGPVGAARVAYIDGQYVLNPSREQIAKSKLDLV
VAGTEQAVLMVESEAQELPEDVMLGAVVFGHEQMQTAINAIHDLVREGGKPEWNWAAAAK
NEALIARVTELAEGPLRAAYQTREKQARTQQLRAVSTDVLAKLSEGGAAPDEIEVGNILF
DLESRIVRSQILAGEPRIDGRDTRTVRPITIRTGVLPRAHGSALFTRGETQALVVATLGT
KSDEQIIDALQGEYRDRFMLHYNFPPFSTGETGRVGSPKRREIGHGRLAKRALVACLPGA
DDFGYTVRVVSEITESNGSSSMASVCGGSLAMMDAGVPLTSPVAGIAMGLILEGNKFAVL
TDILGDEDHLGDMDFKVAGTANGVTALQMDIKIQGITKEIMQVALAQAKEGRLHILGKMT
EAQSGVRTELSEFAPRMVTIKINPEKIRDVIGKGGSVIRALTEETGTSIDISDDGVVTIA
SPSAEGIAEAKRRIELITVEVEVGQVYDGTVLKLLEFGAIVSVLPGKDGLLHISEIANER
IKDINEYLKEGQAVRVKVIQQDDKGRLRLSHKALTDDEKQGGPVLVKREGEAQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaatgttcaataaagtcgtgaagtctttccaatggggacaaaacacggttcgcatg
gagaccggtgagatcgcccgtcaggcgtccggtgccgtgctcgtcgacatggacgacacc
gttgtgctcgccacggtcgttggtgccaagaacgccaagccgggccaggatttcttcccg
ctgacggtcgactacctggaaaagacctatgccgcaggcaagattccgggtggcttcttc
aagcgtgaaggccgtccgtcggaaaacgaaacgctgacgtcgcgcctgatcgaccgtccg
atccgaccgctgttcccggaaggcttctacaacgaagtgcaggtcgtggtgcaggtcgtc
tcgctcaacccggacgtgccggccgatattccggccctgatcggcgcctcggctgcactg
gccgtctcgggtctgccgttcaacggcccggtcggcgccgcgcgcgtggcctacatcgac
ggccagtacgtgctgaatccgtcgcgtgagcagatcgccaagtctaagctggacctggtc
gtcgccggtacggaacaagccgtgctgatggtggaatcggaagcacaggagctgccggaa
gacgtgatgctgggtgccgtggtgttcggccacgagcagatgcagacggcgatcaacgcc
attcacgacctcgtgcgcgaaggcggcaagccggagtggaactgggccgcggccgccaag
aacgaagcgctgatcgcccgggtgaccgagctggccgaaggcccgctgcgcgccgcttat
cagacgcgcgaaaagcaagctcgtacgcaacaactgcgtgcggtgagcaccgacgttctt
gccaagctgagcgaagggggtgcagcgccggacgagatcgaagtcggcaacatcctgttc
gatctcgagtcgaggatcgtgcgcagccagatcctggccggcgagccgcgtatcgacggc
cgcgacacgcgcacggtgcgtccgatcaccatccgcaccggtgtgctgccgcgtgcccac
ggctcggcgctgttcacgcgcggcgaaacgcaggcgctggtggttgccaccctcggcacg
aagagcgacgagcagatcatcgacgcgctgcaaggcgagtaccgtgatcgcttcatgctg
cactacaacttcccgccgttctcgaccggcgaaacgggccgtgtgggctcgcccaagcgt
cgcgaaatcggtcacggccgtctggccaagcgtgcgctcgtcgcatgcctgccgggtgcc
gacgacttcggctacaccgtgcgtgtggtgtcggaaatcaccgagtcgaacgggtcgtcg
tcgatggcatcggtgtgcggcggcagcctcgccatgatggacgccggcgtgccgctgacc
tcgccggtcgccggtatcgcgatgggcctgatcctcgaaggcaacaagttcgccgtgctg
accgacattctcggcgacgaagaccacctgggcgacatggatttcaaggtggccggtacc
gccaacggcgtgaccgcgctgcagatggacatcaagatccagggcatcacgaaggaaatc
atgcaggtcgcgctggcgcaggccaaggaaggccgtctgcatatcctcggcaagatgacg
gaagcccaatcgggcgtgcgtacggaactgtcggaattcgcgccgcgcatggtcaccatc
aagatcaatccggaaaagatccgcgacgtgatcggcaagggcggttcggtcatccgcgca
ctgacggaagagacgggcacgagcatcgatatctcggatgacggcgtggtcacgatcgcc
agcccgagcgccgaaggtatcgccgaagcgaagcgtcgcatcgagctgatcaccgtcgag
gtggaagtgggtcaggtctacgacggcaccgtgctcaagctgctggagttcggcgcgatc
gtctcggtgctgccgggcaaggacggtctgctgcacatttccgaaatcgccaacgagcgc
atcaaggacatcaacgagtacctcaaggaaggtcaagcggtgcgcgtgaaggtgatccag
caggacgacaagggccgtctgcgcctgtcgcacaaggcactcaccgacgacgagaagcag
ggtggtccggtgctggtcaagcgcgaaggcgaggctcagtaa
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