Pandoraea pulmonicola: RO07_25240
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Entry
RO07_25240 CDS
T03553
Name
(GenBank) hypothetical protein
Organism
ppul
Pandoraea pulmonicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
ESPR
Motif
Other DBs
NCBI-ProteinID:
APD13364
UniProt:
A0AAJ4ZAH6
LinkDB
All DBs
Position
1413263..1419706
Genome browser
AA seq
2147 aa
AA seq
DB search
MNHVYRVVWSASLGMYQVASEIASSNGKKSRSVDRRARKVATVAALAVLAATPGPAAAQF
VGSIMESDGSISPLDVGSLNGDGWGWTGQQLHVFSTGPRNATLDGAFSSISVDASASLSG
STNGIVINTPAGTSPASSVLVNGNVGGAATGVSVAGELGTLTNNGNITGQTAVSSTGAIG
TITNTRLIQGGVTGINVSTAGVAVPARVDLIQNGGTIIGGGRGVYNDSSIGTIRNDAGGL
VMSSGGHAIDNQGAIAAIENAGSIQGSSIGVRNLGALIGTLDNSGRITGGAIGVLNGAHI
GTLSNSGLISVSGSPSGTDAVENFGTIGSVVNSGSIAGGSAVWAAGVSNGNRIDTLTNQS
GGRITGDLGVHNESQTMPSGARSIGVLSNSGVIEGVSAGVRNSGSTITSLVNTAATGNAP
AGTISATGAGQFVYGIDNTTVTVSGSVYGASITAIKNGGLISGARAGINNSGSIAVIDNL
AGGTITGAQTGIIAGGTIGTINNAGGAVIQGATAIAVVADSLGAIHNAGAILGSVVNTTT
QDLTITGATDGTYGTLTGADGASVGTIQNMASNLRFTSGSLVLNDNVMLSPGRTLFNSGA
KLRVNQPLSVLGNYQQDAAGTLEIGVSGSAVTTGVYASDTGYGRLVVNGATTLAPGSTIA
LSSMGYTFAAGQRFIVIDSSLPSTYNENSLRYVVNGSTLVGGGVRQSNGNNVDLVVTLYS
PNAVGTIGGTTTLDSGVPASSTGWSFDGRNLTVGGTTFGTITGAVGTVTNNGTLTGTSAF
GIGAGVGSVDRFVNEGSIASTGPSNSGFYNGGVVGTLVNNGQITTATLAAVNNSGSMTAF
ENNGTVTGVSNGLTNLGTLSSVVNKGTVQATNGYGVNDSGRIGQLTNQGLISGFKGLVVN
ATNGVPATVGVVTNTGTITGALAGISNFGSTITKIDNLAGGSIAALGLANNTAAIENVPL
FGTGVQASSIGTISNAGSITSNVYGIRNVGVIDRIDNLASGVITGLTGAIVQEAGASLGT
INNAGTIAGDIINNSTQALSIGGAAGTTFGTLAGLGGGNAVGTIFSSRADVYFTRGNLLL
NDSVDLGRARTLHNSAALLQVNRPLQILGNYDQGADATLQIGVSGLTEGSYGRLNVSGAT
SIAQGSTIALQSMGYAFAAGQRYVVIDTVGTVNYNEGTLRYVLNGAPTSLAASGAHVGST
LTVTLFTPQYLGTVDGTTRLVAGMPSGVVPNWSFDGANLSVTGTAQATITGHIGTLTNNG
TIVSTMASNSALGIGSSGGQIDSIVNNGLITSSGGLNSGLYAGGVVGSIINGGTIQSDNL
GGVNNTGALTSLRNDGLIRGATLGVANTGSLNSLTNTGTVEATVTTSDGVGVWSTSWLGT
LTNSGQIKGYTGVMVAASGDVNLPSSLTALDNRGSITGRTAGVANYGGAIAAINNLTNGV
ITAGTGTAGEFAQGVYNSPKQVGGTLYGGTIGAINNAGLISAAYYGIDNAAAIGTINNQA
GGLITGLGGAISNQAPTASIGQINNAGVIAGWVINRSQNDLRIAGATNGTFGTITSFGPT
YGGTIVSTNADVRFNGGNLVIGNNFDLAGTRTAYNDASVLQFNKPVQISGNFAQAAGATL
QIGVASNAVTTGDMTTDAGYGRLVVSGNTTLAAGSRVALQSLGYSFAPGQRYVVIDTAGT
ANYNESSLVYRVNGSTTLGATGANVANGNKRDLVVTVVSDPNAGSGDNGGSTPGNGGSTG
GGANPGSGITPGGSAGGNTVTRPSFDPRTNATIASAPNAQSALYGLLGYTGISDARLLNL
YNATLGSLSDGSSASADRVGKQLAPSQNARAAGAATFDSLGVVNAHVNDLRLAQAGGTGV
ATGDSGAQWSVWGQAFGGHASQSQRDGVDGYSANYGGLLVGADRAFGDHWRAGGAFQFSR
TNINNDGSTSGNSTGVNGYGLIGYAAYTGEPWYVNLSGSVVLQRYDTKRFVTMQGFSGTA
NGNFNGQQYVASAEFGWPLALGRAVVTPLASVTYSYLNQNSYTETGGNGTALTVGSAGAS
SVRSALGAKFAVPFETSAGTWVPELSVRWVHEYNRTRQATSASFAADPLGQTGFTSVGAT
PVSNLADVALGLTLVRSNNLSASIRYDLQAGSGFVSHTGIVRVQQRF
NT seq
6444 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgtctaccgcgtcgtatggagcgccagcctgggcatgtatcaggtggcgtcg
gaaatcgcgtcgagcaacggcaagaagtctcgctcggtggatcggcgggcacgcaaggtg
gcaactgtggcggcgctcgcggtgctcgcggcgacgccgggccccgcagcagctcagttc
gtcggctcgatcatggaaagcgatggctccatctcgccgctggacgtggggagcttgaac
ggagacggttgggggtggactgggcagcaactgcacgtattttccacggggccgcgcaat
gccacgctcgacggggctttctcctctatctcggttgatgcgtcggccagcctgagcggg
agcacaaacgggattgtcatcaacacgccggctggcacatcgccggcgtcttctgtgttg
gtcaacggtaacgtggggggtgcggccacaggggtgagcgtggcaggcgagttgggtacc
cttaccaacaacggcaacatcaccggacagacggctgtgtcgtcgaccggtgcgatcggg
acgattacaaatacgcgcctgatccagggcggcgtgacgggtattaatgtctcgaccgcg
ggcgttgccgtgcctgcgagggtcgacctgatccagaacggcggcacgattatcggcggc
ggtaggggcgtctacaacgactcgagcattggcaccattcgtaatgatgccggtgggctc
gtcatgagcagcggcggtcatgccatcgacaaccagggcgctattgccgctatcgagaat
gcggggagcatccagggttcgagcatcggcgtgcggaatctcggcgcgctgatcggtacg
ctcgacaatagcggccggatcaccggtggcgcgatcggtgtactcaacggcgcacacatt
ggaacgttgtccaactcgggcttgatctcagtctcaggttctccgagcggcaccgacgct
gtggagaatttcggcaccatcggaagtgtggtcaattcgggcagcattgcaggcggatcg
gccgtgtgggccgctggcgtgagcaatggcaaccggatcgacacgttgacgaaccagagt
ggcggtcgcatcaccggggatctcggcgtccacaacgaaagccaaacgatgccgagcggt
gcgcgttccatcggcgtactgtcgaacagcggcgtgatcgagggcgtaagtgccggggta
cgcaatagtggcagcaccatcacgtcgctcgtcaacacggcggcaaccggaaatgcaccg
gcaggtacgatttcggcgaccggcgctgggcagttcgtttatggcatcgacaataccacc
gtcaccgtcagcggctcggtgtatggcgcgagcatcacggcgatcaagaacggcggtctg
atcagcggcgcacgtgccggtatcaacaattccggctcgatcgctgtgatcgacaacctt
gcgggcggtacgatcactggtgcgcaaaccggcatcattgccggcggtacgatcgggacg
atcaacaacgcaggcggcgcagtcatccagggcgcgacggccatcgccgtggtcgcggac
tcgctcggtgcgatccacaatgcgggcgcgattcttggcagcgtggtcaatacgacgaca
caggacctgacgatcaccggtgccaccgacggcacgtacggcaccctcacgggagccgac
ggtgcgtctgtcggtacgatccagaatatggcatcgaacctgcgttttaccagcggcagc
ctcgtgctcaatgacaatgtcatgttgtcgccgggtcgaacgctgttcaacagcggtgca
aaactgcgcgtcaatcagcccctcagcgttctcggcaactaccagcaggatgccgccggc
acgctcgaaatcggtgtaagcggtagcgcggtgactacgggcgtttacgcgagcgacacc
ggctatggtcgtctcgtcgtgaacggcgcgacaacactggcaccgggctcgaccatcgcg
ctcagctcgatgggatacacgtttgcggcgggccagcgtttcatcgtcatcgattcgtcg
cttccctcgacgtacaacgaaaactcgctgcgctacgtcgtcaatggttcgacgctcgta
ggcggtggcgtgcgccagagcaatggcaataacgtcgatctggtcgtcaccctctattcg
ccgaacgccgtgggcacgatcggcgggaccacgacgctcgacagcggtgtaccggccagc
agcaccggctggagcttcgacggcagaaatctcacggtgggcggcaccacattcgggacg
atcactggtgcggtcggcacggtcacgaacaacggtacgctcaccggcacgtcggcgttt
ggcatcggcgcgggcgtgggctcggtcgatcgcttcgtgaacgagggcagcattgcctcg
accggtccgtcgaactcgggcttctacaacggtggggtcgtcggtactttggtgaacaat
ggtcagatcacgacggctacgctggccgcagtgaacaactccggttcaatgactgcgttc
gagaacaatgggacggtcaccggcgtatcgaacgggctcacgaacctgggcacgctctcg
tccgtggtgaacaagggaaccgtgcaggcgaccaatggttatggcgtgaacgactcgggc
aggatcggccagttgacgaaccagggtctcatcagcggcttcaaggggctcgtggtcaac
gctacgaatggcgtgccggccacagtgggcgtcgtcacgaacacgggcacgatcaccggc
gcgctggccggcatctcgaacttcggctcaaccatcacgaagatcgataacctagcgggc
gggtcaattgccgcactggggctcgcgaacaacaccgccgctatcgaaaacgtgccgctt
ttcgggactggcgttcaggccagttcgatcggcacgatcagcaacgcgggttcgatcacg
agcaacgtctacggtattcggaacgtcggcgtcatcgatcggatcgacaacctggcgagc
ggcgtgatcactggacttactggtgcgatcgtgcaggaggccggtgcgtcgctcggcacg
atcaataacgcgggtacgatcgcaggcgatatcatcaacaactcgacccaagcgctcagt
atcggcggtgctgcgggaacgacgttcggcacgctcgccgggctcggcggcggcaatgcc
gtcggcacgatcttcagttcgcgggctgacgtgtacttcacgcggggtaacctgttgctc
aacgatagcgttgatctggggcgtgcgcgaacgctgcacaacagcgctgcgctgctgcag
gtcaatcggccgttgcagatcctgggcaactatgaccagggtgcggatgcgacgttgcaa
atcggcgtgagcggcttgaccgaaggcagctatgggcgtctgaacgtgagcggcgcaacg
tcgattgcgcagggctcgaccatcgcccttcagtcgatgggctacgcgttcgcggccggt
cagcgctatgtcgtgatcgacacggtcggcaccgtgaactacaacgagggcacgcttcgc
tacgtcctcaacggcgcgcccacgtcgctcgccgcgagcggcgcccacgtgggcagcacg
ctgaccgtcacgctcttcacgccgcaatacctcggtaccgtcgacggtacgacgcgtctg
gtcgctggcatgccgagcggtgtggtgccgaactggagcttcgacggcgcgaatctctcg
gttaccggcacggcgcaagcgacgatcacaggccatatcggcacgctcaccaataacggc
acgatcgttagcacgatggcaagcaatagcgcgctgggaatcggcagcagcggtggccag
atcgacagcatcgtgaacaacggcctgattacgtcgtcgggcggcctgaattcgggtctg
tacgcgggcggtgtcgtgggcagcatcatcaacggcggcaccatccagtcagacaacctg
ggcggcgtcaacaacactggcgcgttgacgagcctgcgcaacgacggtctgatccgcggc
gcaacgcttggcgtggccaataccggttcgctgaattcgctcaccaacacaggcacggtc
gaggcgaccgtcaccacgtccgacggcgttggtgtctggagcacgagctggctcggtacc
ctcacgaacagcggtcagatcaaaggctataccggcgtgatggtagctgcgtccggtgac
gtgaacctgccttcgtcgctcaccgcgctcgacaatcgcggcagcatcacggggcgtacc
gccggcgtcgccaattatggtggagcgatcgcggcgatcaataatctgacgaacggtgtc
atcacggcaggcacgggaacggcgggagagtttgctcaaggcgtatacaacagcccgaaa
caggtgggcggcacgctttacggcggcaccattggcgcgatcaacaatgcagggctgatt
tcggcggcgtactacggcatcgacaacgctgcggcgatcggtacgatcaacaaccaggcc
ggcggcttgatcacggggttgggcggcgcaatttccaatcaggcgccgacagcgtcgatc
ggccagatcaacaatgccggtgtgatcgcagggtgggtcatcaaccgctcgcagaacgat
ctgcgcattgccggtgcgaccaacggcactttcggcacgatcacgagcttcggtccgacc
tatggcggcaccatcgtcagcaccaatgccgatgttcgtttcaacggcggcaatctcgtc
atcggcaataatttcgatctggccggcacacgtacggcgtataacgatgcgtcggtgctg
cagttcaacaagccggtgcagatttcgggcaacttcgcgcaggcggccggcgcaacgctc
cagatcggcgtggcgagcaacgccgtgacgaccggtgacatgacgacggacgccggctac
ggacgcctggtggtgagcggcaacacgacgctggccgctggttcgcgcgtcgcgctgcag
tcgctcggctactcgtttgcgccgggacagcgttacgtcgtgatcgacacggccgggacc
gcgaattacaacgaaagctcgctggtgtatcgcgtgaacggttcgacgacgctcggcgcg
accggcgccaacgtcgccaacggcaacaagcgggatctggtcgtcaccgtggtctcggat
ccgaacgccggttcgggcgacaacggtggtagcacccccggcaacggcggcagcacgggc
ggcggcgcgaacccgggcagcggcataacgcctggcggcagcgccggcggcaacacggtg
acgaggccgtcgttcgacccgcgcaccaacgcaaccattgcgtcggcgccgaatgcacag
tcggcactgtatggcctgctcggctatacggggatcagcgacgcgcgtctgctgaatctg
tacaacgccacgcttggctcgctctcggacggctcgagtgcgtcagccgaccgcgtgggc
aagcaactggcgccgtcgcagaatgcgcgtgcagccggtgcggcaacgttcgattcgctc
ggcgtggtcaacgctcacgtcaacgatctgcgtctggcgcaggcaggcggtacgggcgtc
gccaccggcgacagcggggcgcagtggagcgtgtgggggcaagccttcggcggccacgcg
agccagtcccagcgtgatggcgtggacggctacagcgccaactacggtggcctcctcgtg
ggggcggatcgcgccttcggcgatcattggcgcgcaggcggcgcattccagttctcgcgc
accaatatcaacaacgacggcagcacgtccggcaactcgaccggcgtcaacggctacggt
ctgatcggttacgccgcgtacaccggcgagccgtggtacgtgaacctgtcgggctcggtg
gtgctgcagcgctacgacacgaagcgattcgtgacgatgcagggtttcagcggtacggcc
aacggcaacttcaacggtcagcaatacgtggcaagcgccgagttcggctggccgctggca
ctgggccgtgctgttgtcacgccgctcgcgagcgtcacgtatagctatctcaaccagaac
agctacacggaaaccggcggcaacggcaccgcgctgacggtcggcagcgccggggcgagc
tcggtgcgcagtgcgctcggtgcgaagttcgcggtgcctttcgagacgtcggcaggaacc
tgggtgccggagctgagcgtgcgctgggtgcatgagtacaaccgtacgcgtcaggcgacg
tcggccagcttcgccgcggacccgctcggccagactggctttaccagcgtgggcgccacg
ccggtgtcgaacctggcggacgtcgcgctgggtctgacgctggtgcgctcgaacaacctg
agcgcgtcgattcgctacgacctgcaggccggatcgggtttcgtctcgcacacgggcatc
gtgcgtgtgcagcagcgcttctga
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