Pandoraea pulmonicola: RO07_25680
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Entry
RO07_25680 CDS
T03553
Name
(GenBank) hypothetical protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ppul
Pandoraea pulmonicola
Brite
KEGG Orthology (KO) [BR:
ppul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppul01011
]
RO07_25680
Enzymes [BR:
ppul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RO07_25680
Peptidoglycan biosynthesis and degradation proteins [BR:
ppul01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RO07_25680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SepF
Motif
Other DBs
NCBI-ProteinID:
APD13692
UniProt:
A0AAJ4ZDA1
LinkDB
All DBs
Position
complement(5648136..5648825)
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AA seq
229 aa
AA seq
DB search
MLTRFAVGCALALTLTACTTPLEPPSQTAAATPATGGGARAREANAPVGSSFDLHWPGRA
YRNEGLNPGDPNAPERDGEARLRADAGTFFQTGTASWYGKKFHGRRTATGETFDMNELTA
AHPTLPLASFVLVRNVANNKAVVVKINDRGPYTRKRIIDLSYGAAKQLDFIRAGHTKVEI
RRLSRSEIAALGLDEAGNNSNASRVPTPPPAAPAPSADTVPPAPKADAS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgctcacacggttcgcggtcggctgcgccctcgccctgacgttgacagcctgcacaacg
ccgctcgaaccccccagccagacggctgccgccactccggcgacaggcgggggtgcgcgt
gcgcgcgaagccaacgcgccggtcggctcgagtttcgacctgcattggccgggccgggcg
tatcgcaacgaggggctcaatcccggcgacccgaatgcgccggagcgtgacggcgaagcc
cgcctgcgcgcggacgcgggcaccttcttccagaccggcacggcctcgtggtacggcaag
aagtttcacgggcgccgcaccgcgaccggcgaaacgttcgatatgaacgagctcaccgcc
gcgcatcccacactgccgctggccagcttcgtgctggtgcgcaacgtcgccaacaacaag
gcggtggtcgtgaagatcaacgatcgcgggccctacacgcgcaagcgcatcatcgatctg
tcctacggggcggccaagcagctcgacttcatcagggcaggccacaccaaggtcgagatc
cgtcgcctgtcgcgcagcgaaatcgcggcactcggcctcgacgaggccggcaacaacagt
aacgcgtcccgagtgccgacaccgccgcctgcggcccccgccccttccgccgacaccgtc
cctcccgcaccgaaagcagacgcgtcttaa
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