Pseudomonas putida NBRC 14164: PP4_01150
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Entry
PP4_01150 CDS
T02707
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun03030
DNA replication
ppun03410
Base excision repair
ppun03420
Nucleotide excision repair
ppun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP4_01150 (polA)
03410 Base excision repair
PP4_01150 (polA)
03420 Nucleotide excision repair
PP4_01150 (polA)
03440 Homologous recombination
PP4_01150 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppun03032
]
PP4_01150 (polA)
03400 DNA repair and recombination proteins [BR:
ppun03400
]
PP4_01150 (polA)
Enzymes [BR:
ppun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PP4_01150 (polA)
DNA replication proteins [BR:
ppun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PP4_01150 (polA)
DNA repair and recombination proteins [BR:
ppun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PP4_01150 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PP4_01150 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
BAN51968
LinkDB
All DBs
Position
119858..122605
Genome browser
AA seq
915 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFD
AKGGTFRDAMFAEYKANRPSMPDDLRVQVEPLHASVRALGYPLLCVEGVEADDVIGTLAR
SSAAQGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALM
GDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAKTLPAKLEEHRDA
AFLSYELATIKVDVPLDVEVEALVCGEPDRDALLALYTEMEFKSWVAEVQRDAARAGTEV
APVAEPTAKVEPQYETVLDQARFDAWLEKLRQAPLFAFDTETTGLDAQKAQLVGLSFAVA
PHEAAYVPLAHDYEGAPAQLDREAVLLALKPLLEDPAKAKVGQNAKYDINILANGSPAIE
MRGVAYDTMLESYVLNSTATRHDMDSLAQKYLDHTTIAFEDIAGKGAKQLTFNQIHLDKA
GPYAAEDADITLRLHQALQTRLAQTPGVLPVLMDIEMPLVPVLAKIERQGALVDAALLHV
QSGELGVKMAELELRAYELAGEEFNLGSPKQLGSILYDKLGMPVLSKTAKGQPSTAEAVL
DELALLGYPLPEVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQAVAATGRLSSSD
PNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQIELRIMAHLAKDEGLLHAFRNDLDV
HRATAAEVFGVALEDVTTDQRRKAKAINFGLIYGMSAFGLAKQIGVDRKQSQDYIDRYFA
RYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAPMQGTAA
DIIKRAMVNVDNWLSESGLDARVILQVHDELVLEVREDLVQQVKDEIRQHMSQAAQLDVP
LLVEAGIGANWDEAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcctcctacctgtaccgcgccttccac
gcgctgccgccgctgaccacgtccaagggcatgccgaccggtgcggtgaagggtgtgctg
aacatgctcaagagcctgcgcaagcagtacccggacagcctgttcgcggtggtgttcgac
gccaagggcggcacattccgtgatgccatgttcgcagagtacaaggccaaccgcccaagc
atgcctgacgacctgcgggtgcaggtcgagccgctgcacgccagcgtgagggcacttggc
tacccgctgttgtgcgttgagggtgtcgaagccgacgacgtgatcggcaccctggcgcgc
agcagcgccgcccagggccgcccggtgatcatctcgaccggcgacaaggacatggcccag
ctggtggacgggcacattaccctggtcaacaccatgaccggtagcgtgctggacgtggct
ggcgtgcacgagaaatttggcgtcggcccggaacatatcatcgacttcctggccctgatg
ggtgacaaggtcgacaacatcccaggcgtacccggcgttggcgaaaaaaccgcggtgggc
ctgctgaccggtatcggcggtggcctcagcgacctttacgccaacctggacaaggtgccg
gcgctggccattcgcggcgccaagaccttgccggccaagctggaggagcaccgcgatgcg
gcgttcctttcctacgaactggccaccatcaaggtcgatgtgccgctggatgtcgaggtc
gaggcactggtgtgtggcgagcccgaccgcgatgcgctgttggcgctgtacaccgagatg
gagttcaagagctgggttgccgaggtgcagcgcgacgcggcaagggctggtactgaggtt
gcgccggtcgcagagccgacggccaaggtcgagccgcagtacgaaaccgttctggaccag
gcccgtttcgacgcatggctggaaaagctgcgccaggcgccgctgtttgcctttgatacc
gaaacaaccggcctggatgcccagaaggcgcagctggttggcctgtctttcgctgtcgcg
ccccatgaggcggcttatgtgcccttggcgcacgactatgaaggtgcgccggcccagttg
gaccgcgaggctgtattgctggcgctgaaaccgctgctggaagacccggccaaggccaag
gtcgggcagaacgccaagtacgacatcaatatcctcgccaacggttcgcccgccatcgaa
atgcgcggcgtggcctacgacaccatgctcgagtcgtatgtgctgaattccaccgctacc
cgtcacgacatggacagcctggcgcaaaagtacctcgaccacaccaccattgccttcgag
gacatcgccggcaaaggcgccaagcagctcaccttcaaccagatccacctggacaaggcc
ggcccttacgctgccgaagacgccgacatcaccctgcgcttgcaccaggcgctacagacg
cgcctggcgcagacgccgggcgtgctgccggtgctgatggacatcgaaatgccgctggtg
ccggtgctggccaagatcgagcgtcaaggtgcgctggtcgatgccgcactgcttcacgta
cagagcggtgagctgggcgtgaagatggccgagctggagctgcgggcctacgagctggcc
ggtgaagaattcaacctcggctcgcccaagcagctgggttcgatcctttacgacaagctg
ggcatgccggtgctgagcaagaccgccaagggccagccatccaccgccgaagccgtactc
gatgaactggccttgctcggctacccactgcctgaggtactgatgcagtaccgcagcctg
agcaagctcaagagcacctacaccgacaagctgccgggccagatcaacccgcgcaccggg
cgaatccacacctcctatcagcaggcagtggcagcgaccggccggttgtcgtcgagcgac
ccgaacctgcagaacatcccgatccgtaccgccgagggccggcgtatccgccaggcgttc
attgccagcccgggctacaaactgctggcggcggactactcgcagatcgagctgcgcatc
atggcccacctggccaaggacgaaggcctgctgcacgccttccgcaacgacctcgacgtg
caccgggcaacggcggcggaagtgttcggtgttgccctggaagacgtcaccaccgaccag
cgtcgcaaggccaaagccatcaacttcggcctgatctacgggatgagcgcctttggcctg
gccaagcagatcggcgtcgaccgcaagcagtcgcaggactacatcgaccgttacttcgcc
cgctacccgggcgtgctggcctacatggagcgcacccgtgcgcaggccgccgagcaaggc
tttgtcgaaaccctgttcggccgccgcctgtacctgccagacatcaacgccaagaacccg
gccctgcgcaaaggcgccgagcgtacggcgatcaacgcgccgatgcagggcaccgcagcc
gacatcatcaagcgggccatggtcaatgtggataactggctgagcgagagcgggctggat
gcccgggtgatcctgcaggttcacgacgaactggtgctggaggtgcgtgaagacctggtt
cagcaggtgaaagatgaaattcgccagcacatgagccaggccgcacaactggatgtgccg
ctgctggtggaggcaggaattggcgcaaattgggacgaagctcactga
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