KEGG   Pseudomonas putida NBRC 14164: PP4_03840
Entry
PP4_03840         CDS       T02707                                 
Name
(GenBank) putative exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ppun  Pseudomonas putida NBRC 14164
Pathway
ppun03030  DNA replication
ppun03430  Mismatch repair
ppun03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PP4_03840
   03430 Mismatch repair
    PP4_03840
   03440 Homologous recombination
    PP4_03840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppun03032]
    PP4_03840
   03400 DNA repair and recombination proteins [BR:ppun03400]
    PP4_03840
Enzymes [BR:ppun01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PP4_03840
DNA replication proteins [BR:ppun03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PP4_03840
DNA repair and recombination proteins [BR:ppun03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PP4_03840
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DUF6621
Other DBs
NCBI-ProteinID: BAN52237
UniProt: A0ABM7E9G0
LinkDB
Position
complement(453906..454616)
AA seq 236 aa
MSLFTWLRPSAPELDPATRQRLSRLPKPTPLGVCTLREQRWVVLDLETSGLNPNRDQVLS
IGAVAIEDGAIDFAQQFERTLHRPLQKTNASVLIHGLGPGALAAGCDPAEALLDLLDFIG
NSPVLAFHAPFDQRMLARALKESLGHRLQSLFLDVAELAPMLNPDTVLREAGLDDWVARF
GLQVEERHHASADAQVTAELALILFSQARRQQLDSPLQLEQRLRGWRRRKAQSHGL
NT seq 711 nt   +upstreamnt  +downstreamnt
atgagcctgttcacctggctacgccccagcgcgcccgaactggaccccgccacacgccag
cgcctgagccggttgcccaagcccacgccgctgggggtatgcaccctgcgtgaacagcgc
tgggtggtgctggacctggaaaccagcgggctcaaccccaaccgggaccaggtattgtcg
attggcgcagtggccatcgaagacggcgccatcgattttgcccagcagttcgaacgcacc
ctgcacaggcctttgcagaagaccaacgccagcgtgctgattcatggcctgggccccggc
gcccttgccgccggttgcgacccggccgaggccctgctcgacttgctcgatttcattggc
aacagcccggtgctggcgtttcatgcgcccttcgaccagcgcatgctggcccgtgcgctg
aaggaaagccttgggcatcgtctgcagtcactgttcctcgacgttgccgaactggcgccg
atgctaaaccccgacacggtgctgcgcgaggccgggctggatgactgggtggcgcggttt
ggtttgcaggtggaagagcgccaccatgccagtgccgatgcccaggtgaccgcagagctg
gcgctgatactgttcagccaggcccggcgccagcagctggacagcccgttgcaactggag
cagcggttgcgtgggtggcggcggcgcaaagcacagagtcatggcctgtag

DBGET integrated database retrieval system