Pseudomonas putida NBRC 14164: PP4_05120
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Entry
PP4_05120 CDS
T02707
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PP4_05120 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppun03021
]
PP4_05120 (rpoA)
03400 DNA repair and recombination proteins [BR:
ppun03400
]
PP4_05120 (rpoA)
Enzymes [BR:
ppun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PP4_05120 (rpoA)
Transcription machinery [BR:
ppun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PP4_05120 (rpoA)
DNA repair and recombination proteins [BR:
ppun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PP4_05120 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
BAN52365
UniProt:
A0ABN5UFM9
LinkDB
All DBs
Position
588320..589321
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGALNMKLTVARGRGYEPADSRQTDEDESRSIGRLQLDASFSPVR
RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEVIRRAATILQQQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgactccccgccacattgatgtgcaggtagtcagt
ccgacccgcgccaagattacgctcgagcctctcgagcgtggtttcggccataccctgggc
aacgcgctgcgccgcatcctgttgtcctccatgcctggctgtgcagtagtcgaggccgag
atcgatggcgtactccacgagtactccgcgatcgaaggtgtacaggaagacgtaattgaa
atcctgttgaacctgaaaggcctggctatcaaactgcacggtcgtgacgaagttacgctg
accttgtcgaaaaagggttcgggggtggttaccgctgccgatattcagctggatcacgat
gtcgagatcgtcaaccccgatcacgtaatcgcgaacctggcgtcgaacggcgccctgaac
atgaagctcactgtagctcgtggtcgcggttacgagccggctgactcccgtcaaaccgac
gaagacgaaagccgtagcattggccgtctgcagttggacgcttcgttcagcccggtgcgt
cgtatcgcctatgtggtcgaaaacgcccgtgttgaacagcgtaccaacttggacaagctg
gtcattgatctggaaaccaacggtaccctggatcctgaagaggttatccgccgcgctgcg
accatcctgcaacagcagttggccgcgttcgtcgacctcaaaggtgacagtgagcccgtc
gtagtcgagcaggaagacgagatcgatccgatcctgctgcgtccggttgacgacctggaa
ctgactgtacgttcggccaactgcctcaaggcggagaacatctactacatcggcgacctg
attcagcgtaccgaagtagagctgttgaagactcctaacctgggcaagaagtccctgact
gaaatcaaggacgtcctggcctctcgtggtctgtctctcggcatgcgcctcgacaactgg
ccgcctgcaagtcttaagaaagacgacaaggcgaccgcctga
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