Pseudomonas putida NBRC 14164: PP4_06180
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Entry
PP4_06180 CDS
T02707
Name
(GenBank) putative transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppun
Pseudomonas putida NBRC 14164
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppun03000
]
PP4_06180
Transcription factors [BR:
ppun03000
]
Prokaryotic type
Helix-turn-helix
Other families
PP4_06180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
PAS_9
PAS_4
AAA_5
HTH_AraC
PAS_8
HTH_23
HTH_22
HTH_7
HTH_50
AAA_2
HTH_17
RWP-RK
HTH_30
HVO_A0261_N
AAA
HTH_20
dnstrm_HI1420
HTH_IclR
HTH_Tnp_1_2
HTH_10
PAS_7
Diguanyl_cycl_sensor
IclR_C
MCM
Motif
Other DBs
NCBI-ProteinID:
BAN52471
UniProt:
A0ABM7E9Y2
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All DBs
Position
721641..723710
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AA seq
689 aa
AA seq
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MQSNHFSRHAQQVHTVAHGGAGEGGSDPSIARSWLRCLEDYHLDPAVIAAPVVLEHGRLL
ESRERLRQVLQIADPEMNSLHQQLSGAGHAVLLTDARGVILNCVSAPTERRSFERAGLWL
GADWSEAREGTNGIGTCLVERQALTIHQNEHFRGRHTGLTCSASPVFDPHGELLAVLDVS
SARPDVSRQSQFHTMALVNLSAKMIESCYFLRHFEQQWLLRFHLQAESVGLFSEGLLAFD
GDGRICAANQSALNLLGTVRGGVLGKPMQRFFACSHDELFNRAMPAGSTVWPLHTLDGRQ
VFASLRGQARTPVWSVPTAYRQPVREVEPAICLLDPALQNDFRRCVRVFERDVPLLLRGE
TGCGKEAFAQAVHQASERRGKPFVAINCASIPESLIESELFGYRGGSFTGARKEGMRGKL
LQADGGTMLLDEIGDMPLALQTRLLRVLEERQVVPIGGEPQAVDVRIVSATHRHLLERVE
QGSFREDLYYRLNGLEVALPAVRDRSDKAQLLDFLLRQEAQGHRVELEPSARQALLDFTW
PGNVRQMRNVLRTLVALCEDARIMFSDLPAVVREGSALDRRQASSHPDHTGFKPFVNPRG
SGLPVAGPEQALEGSCTYRVNRAFEADAAPVGAGLPAIGSAALKEAERHALLATLEAKHW
HLTRVAEHLGISRNTLYRKLRKHGITRAD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcaatcatttcagtcgccatgcccagcaagtccataccgttgcccatggtggc
gccggggagggcggcagtgacccgtccatcgcccgctcctggctgcgttgcctggaggac
taccacctcgaccctgcggtgatcgcggccccggtggtgcttgagcacgggcgcctgctg
gaaagccgcgagcgcctgcgccaggtgctgcaaattgccgaccctgaaatgaacagcctg
caccagcagctttccggggccggccacgcggtactgctgaccgacgcccgtggggtaatc
ctcaactgcgtcagcgcgcccaccgagcggcgcagcttcgagcgtgccgggctgtggctg
ggcgccgactggagcgaagcgcgcgagggcaccaacggcatcggcacctgcctggtcgag
cgccaggccctgaccatccaccagaacgagcactttcgtggccgccataccggcctgacc
tgttcggcgagcccggtgttcgacccgcatggcgaactgctggcggtgcttgacgtatcg
tcggcccggcccgatgtttcgcgccagagccagttccacaccatggcgttggtcaacctt
tcggcgaagatgatcgaaagctgctatttccttcgccatttcgagcagcagtggctgctg
cgtttccacctgcaggccgagtcggtcggcctgttcagtgaagggctgctggccttcgac
ggtgacgggcgcatctgcgcggccaaccagagcgcgctgaacctgctgggtactgtgcgc
ggtggcgtgctgggcaaacccatgcagcgcttcttcgcctgcagccacgacgaattgttc
aaccgcgccatgcccgctggcagcacggtatggccgctacacaccctggacggccgccag
gtgttcgccagcctgcgtggccaggcccgtacgccggtatggtcagtgcccaccgcctac
cggcagcccgttcgcgaggtggaaccggccatctgcctgctcgacccggcgttgcaaaac
gattttcgccgctgcgtgcgggtgttcgagcgtgacgtgccgttgttgctgcgcggcgaa
accggttgtggcaaggaggcgttcgcccaggccgtgcaccaggccagcgagcggcgcggc
aagccgtttgtcgccatcaactgcgcctcgatcccggagagcctgattgaaagcgagctg
ttcggttaccgcggtggcagctttaccggcgcacgcaaggaaggcatgcgcggcaagctg
ttgcaggctgacggcgggaccatgctactggacgagatcggcgacatgccgctggccctg
caaacccgcctgctgcgggtgctggaagagcgccaggtggtgccgatcgggggtgaaccg
caagcggttgacgtgcgcattgtcagcgctacccaccgccacctgctggaacgggtggag
cagggcagtttccgcgaggacctgtattaccgcctgaatggcctggaggtagcgttgccg
gcggtgcgcgatcgcagtgacaaggcgcagttgctggacttcctgctgcgtcaggaggcg
caggggcatcgggtcgagctggagcccagtgcgcgccaggcgctgctggacttcacctgg
ccggggaacgtgcggcagatgcgcaatgtgctgcgtacattggtagcgctttgcgaagat
gcccgaatcatgttctcggatctccccgccgtcgtccgcgagggctctgccctcgatcgc
cggcaagccagctcccaccccgatcacactggcttcaagccatttgtaaatccaagggga
tccggcttgccggtggcagggccagagcaggcgctggaaggcagttgcacctacagggta
aatagggctttcgaagctgacgctgcacctgtgggagctggcttgccggcgatagggtcg
gcagcgttgaaagaggccgagcgccatgcgctgctggcgaccctggaggcaaaacactgg
cacctgacccgcgtcgccgagcacctgggcatcagccgcaataccttgtatcgaaaactg
cgcaaacacggcatcaccagggccgactga
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