KEGG T02707: PP4

Pseudomonas putida NBRC 14164: PP4_07030

Entry

PP4_07030         CDS       T02707

Symbol

trmA

Name

(GenBank) tRNA (uracil-5-)-methyltransferase

K00557

tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]

Organism

ppun Pseudomonas putida NBRC 14164

Brite

KEGG Orthology (KO) [BR:ppun00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppun03016]
    PP4_07030 (trmA)
Enzymes [BR:ppun01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     PP4_07030 (trmA)
Transfer RNA biogenesis [BR:ppun03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    PP4_07030 (trmA)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_25 Methyltransf_31 Methyltransf_4 Methyltransf_11 Methyltransf_12 Cons_hypoth95 MTS RrnaAD pP_pnuc_1 DREV Trp_halogenase Methyltransf_15 TRM5-TYW2_MTfase PrmA Ubie_methyltran

Other DBs

NCBI-ProteinID:

BAN52556

LinkDB

Position

complement(829048..830133)

AA seq 361 aa
MSAAFDPSSYATQLDAKVARLRELLAPFGAPEPAVFDSPREHYRLRAEFRLWREDGQRHY
AMFAPGDKHKAILIEDFPIASQRINALMPRLKAAWQASEELGNRLFQVEFLTTLAGDAMI
TMCYHRPLDEAWEAEARQLAEALGVSVIGRSKGKRLVIGRDYAVEKLDVAGRVFSYRQPE
GAFTQPNGAVNQKMLSWAFEAIGERQDDLLELYCGNGNFTLPLATRVRQVLATEISKTSV
NAALSNLDENAVDNVRLVRLSAEELTQALNEVRPFRRLEGIDLKSYDFGTVFVDPPRAGM
DPDTCELTRRFERILYISCNPETLAQNIAQLQDTHRIERCALFDQFPYTHHMESGVLLVR
R

NT seq 1086 nt +upstreamnt +downstreamnt
atgagtgctgctttcgacccctcctcctacgccacccagctggacgccaaggtggcccgg
ctgcgcgagctgctggcgccatttggcgcgccggaaccggctgttttcgactcgccgcgc
gagcactaccgcctgcgcgccgagttccgcctgtggcgcgaggatggccagcgccactac
gccatgtttgccccgggcgacaagcacaaggcgatcctgatcgaggatttccccatcgcc
agccagcgcatcaatgcactgatgccgcgcctgaaggcggcatggcaggccagcgaggaa
ctgggcaaccgcctgttccaggtggagttcctcaccaccctggccggcgatgcgatgatc
acgatgtgctaccaccgcccactggacgaggcttgggaagcagaagcgcggcaactggct
gaagcgctgggcgtgagcgtgatcggccgctccaagggcaagcgcctggtgatcggccgc
gactacgcggtggaaaaactcgacgtggctggccgtgtgttcagctatcgccagccggaa
ggcgcgttcacccagcccaacggcgcggtgaaccagaagatgctgagctgggccttcgag
gccattggcgagcgccaggacgacttgctggagctgtactgcggcaacggcaacttcacc
ctgccgctggccacccgcgtgcgccaggtgctggcgaccgaaatcagcaagacctcggtc
aatgccgcgctcagcaacctcgacgagaacgctgtggataacgtgcgcctggtacgcttg
tcggccgaagagctgacccaggcgctgaatgaggtgcggccgttccgtcgcctggaaggc
atcgacctgaaaagctatgacttcggcacggtgtttgtcgacccgccgcgcgcggggatg
gaccctgacacctgcgagctgacccggcgtttcgagcggatcctgtacatctcctgcaac
cccgagacactggcgcagaacatcgcccagctgcaagatacccaccgtatcgaacgctgc
gcgctgttcgaccagttcccgtatacccatcacatggaaagcggcgtgttgctggtccgg
cgctga

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