Pseudomonas putida NBRC 14164: PP4_07130
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Entry
PP4_07130 CDS
T02707
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppun
Pseudomonas putida NBRC 14164
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppun03400
]
PP4_07130 (radA)
DNA repair and recombination proteins [BR:
ppun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PP4_07130 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
GvpD_P-loop
AAA_22
Rad51
RecA
AAA
SLFN-g3_helicase
DUF7125
nSTAND3
AAA_24
NTPase_1
AAA_14
MCM
zf-C2H2_6
DUF7129
Motif
Other DBs
NCBI-ProteinID:
BAN52566
LinkDB
All DBs
Position
839461..840831
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AA seq
456 aa
AA seq
DB search
MAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPSTGRAGWTGQQAQI
KTLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAVGM
PALYVTGEESQQQVAMRSRRLGLPQDKLKVMTETCIETIIATARVEKPRVMVIDSIQTIF
TEQLQSAPGGVAQVRESTALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDTVLYF
EGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRTQEEVPGSVVMAT
WEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVV
GGVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGLSGEVRPVPSGQERLKEAAKHG
FKRAIVPKGNAPKESPAGLQVIAVTRLEQALDALFE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcttgtatggctgcaccgagtgcggcgcgaccttccccaaatgg
gccggccagtgcggcgaatgcggggcctggaacaccctggtcgaaaccatgatcgagagc
ggcggtgccgcagcgcccagtactggccgcgccggttggaccgggcagcaagcgcagatc
aagaccctggccgaagtcagcgtcgaggaaatcccgcgcttcaccaccagcagcaccgaa
ctggaccgcgtgttgggcggcggcctggttgatggctcggtggtgctgattggtggcgac
ccgggcatcggcaagtcgaccatcctgctgcagaccttgtgcaacatagccgtgggcatg
ccggcgctgtatgttacgggtgaggagtcgcaacagcaggtggccatgcgctcgcggcgc
ctgggcttgccccaggacaagctcaaggtgatgaccgaaacctgcatcgaaaccatcatt
gccacggcacgcgtcgagaaaccgcgggtgatggtgatcgactcgatccagaccatcttc
accgagcaattgcagtcggcacccggcggcgtggcccaggtgcgtgagagcacggcgctg
ctggtgcgttacgccaagcagagcggcacggcgatcttcctggtcggccacgtgaccaag
gaaggctcgctggccggcccgcgggtactggagcacatggtcgataccgtgctgtatttc
gaaggtgagtccgacggccgcctgcgcctgttgcgagcggtgaaaaaccgctttggcgcg
gtcaacgaactgggcgtgttcggcatgaccgaccggggcctgaaagaggtgtccaacccg
tcggctatcttccttaaccgtacccaggaagaagtgccgggcagtgtggtgatggcgacc
tgggagggcacccggccaatgctggtcgaggtacaggcactggtcgacgacagccacttg
gcaaacccgcgccgggtaaccctgggcctggatcagaaccgcctggccatgttgctggcg
gtgctgcaccgccacggcggtattcccacccatgatcaggacgtattcctcaacgtggtg
ggcggtgtgaaggtgctggagacggcttcggacctggcattgctggcggcggtgatgtcc
agcttgcgtaaccggccactggcccatgggctgctggtgtttggcgagatcggcctgtcg
ggcgaggtgcggccggtgcccagtggccaggagcggttgaaggaagcggccaagcatggt
ttcaagcgcgccatcgtgcccaagggcaatgcgccgaaagagtcgccggcggggctgcag
gttattgccgtcacccgcctggaacaggccctggatgcattgttcgagtaa
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