Pseudomonas putida NBRC 14164: PP4_08720
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Entry
PP4_08720 CDS
T02707
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PP4_08720 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppun03019
]
PP4_08720 (groL)
03110 Chaperones and folding catalysts [BR:
ppun03110
]
PP4_08720 (groL)
03029 Mitochondrial biogenesis [BR:
ppun03029
]
PP4_08720 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppun04147
]
PP4_08720 (groL)
Enzymes [BR:
ppun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PP4_08720 (groL)
Messenger RNA biogenesis [BR:
ppun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PP4_08720 (groL)
Chaperones and folding catalysts [BR:
ppun03110
]
Heat shock proteins
HSP60 / Chaperonin
PP4_08720 (groL)
Mitochondrial biogenesis [BR:
ppun03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PP4_08720 (groL)
Exosome [BR:
ppun04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PP4_08720 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PP4_08720 (groL)
Exosomal proteins of breast cancer cells
PP4_08720 (groL)
Exosomal proteins of colorectal cancer cells
PP4_08720 (groL)
Exosomal proteins of bladder cancer cells
PP4_08720 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
BAN52725
UniProt:
A0ABM7EB09
LinkDB
All DBs
Position
1003522..1005165
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLAKSFGAPTITKDGVSVAKEI
ELKDAFENMGAQLVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKATAAVVAELKNLSKPCADSKAIAQVGTISANSDDSIGNIIAEAMEKVGKEGVITVEEG
SGLDNELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGQV
ISEEIGLSLETATLEHLGNAKRVILSKENTTIIDGAGVEDDIQARVKQIRAQIEETSSDY
DREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALNAIVDLKGDNEDQNVGIALLRRAVEAPLRQITANAGDEPSVVADKVKQGSGNFGYNA
ATGEYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMIADAPSEAPAGGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtaaagtttggcgattccgctcgtaagaaaatgctggttggcgtc
aacgttctggctgacgcggtaaaagcgaccctgggcccgaaaggccgtaacgtggtactg
gccaagagcttcggcgcgccaaccatcaccaaggacggcgtttccgtcgccaaagaaatc
gagctgaaagacgccttcgaaaacatgggcgcccagctggtcaaggaagttgcttccaag
gccaacgacgctgccggtgacggcaccaccaccgctaccgttctggctcaggccatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggctaccgccgccgttgttgccgagctgaagaacctgtccaagccatgcgccgac
tccaaggccatcgcccaggtaggcaccatctccgccaactctgacgactccatcggcaac
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggc
tcgggcctggataacgaactgtccgtcgtagaaggcatgcagttcgaccgtggctacctg
tcgccgtacttcgtcaacaagccggacaccatggttgccgagctggaaggcccgctgctg
ctgctggtcgacaagaaaatctccaacatccgtgagctgctgccagttctggaagccgtt
gccaaggccggccgcccactgctgatcgttgccgaagacgttgaaggtgaagcgctggct
accctggtagtcaacaacatgcgcggcatcgtcaaggttgcagcggtcaaggcaccaggc
ttcggcgaccgccgcaaggccatgctgcaggacatcgctgtcctgaccggcggccaggtc
atctccgaagaaatcggcctgtccctggaaaccgctaccctcgagcacctgggtaacgcc
aagcgcgtcatcctgtccaaggaaaacaccaccatcatcgacggcgctggtgttgaagat
gacatccaggctcgcgtcaagcagatccgtgcccagatcgaagagacttcctcggactac
gaccgtgagaagctgcaagagcgtctggccaagctggctggcggtgttgccgtgatcaag
gtcggtgccggcaccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctacccgtgcagccgttgaagaaggcgtggtgcctggcggtggtgttgccctggtt
cgcgccctgaacgcgatcgttgacctgaaaggcgacaacgaagaccagaacgtcggtatc
gccctgctgcgtcgcgctgttgaagcgccgctgcgccagatcactgccaacgccggcgac
gagccaagcgttgtcgctgacaaggtcaagcaaggttcgggtaacttcggttacaacgct
gctaccggcgaatacggcgacatgatcgagatgggcatcctggacccagccaaggtcacc
cgttcggccctgcaagctgctgcttcgattggcggtctgatgatcaccaccgaagccatg
attgctgacgctccgagcgaagccccagctggcggcggcatgccagacatgggcggcatg
ggtggcatgggcggcatgatgtaa
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