Pseudomonas putida NBRC 14164: PP4_09200
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Entry
PP4_09200 CDS
T02707
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ppun
Pseudomonas putida NBRC 14164
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppun03400
]
PP4_09200
DNA repair and recombination proteins [BR:
ppun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PP4_09200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
SLFN-g3_helicase
FtsK_SpoIIIE
CbiA
ResIII
AAA_30
AAA_10
T2SSE
TrwB_AAD_bind
AAA_19
SRP54
AAA_7
Hydrolase
DUF2379
nSTAND3
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
BAN52773
LinkDB
All DBs
Position
1056568..1057980
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AA seq
470 aa
AA seq
DB search
MRLANRHGLVAGATGTGKTVTLQHLAEVFSDAGVAVFAADVKGDLCGLGAAGTPQGKVAE
RIAGMPWLGHTPQAYPVSLWDIAGQSGHPLRTTLSEMGPLLLGNLLELTDSQQAALYAAF
KVADREGLLLLDLKDLKALLAHLKDNPQLLGEDSALMTTASTQALLRRLATLEQQGAEAL
FGEPALQLEDLLRPGSDGRGRIHLLDASRLVHEAPKVYATFLLWLLAELFEQLPERGDAD
KPVLALFFDEAHLLFNGTPKALQDRLEQVVRLIRSKGVGVYFVTQSPGDLPDAVLAQLGL
RIQHGLRAFTAKEQKSLRAVADGFRPNPAFETLAVLTELGIGEALVGTLEEKGTPAMVQR
VLIAPPQSRIGPLSAAERSALIAASPLAGRYDKPVDRESAYEMLTQRKGEAVEPAPQPQA
DGESFADKAGDFLQSAAGQAIKSAVRQAANQLGRQLVRGLMGSLLGGKKR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggccaaccgccatggcctggtggcgggcgcgacgggcaccggcaagaccgtg
accttgcagcacttggcggaagtgttcagcgacgcaggggtggccgtattcgcggccgat
gtcaaaggtgacttgtgtggcctgggtgccgctggcacaccacagggcaaggtggccgag
cgaatcgccggtatgccttggctcgggcacacgccccaggcctacccggtaagcctgtgg
gacatcgccgggcagtccggccacccgctgcgcactaccctcagtgaaatggggccgttg
ctgctgggcaacctcctggagctgaccgacagccagcaggcggcgctgtatgcggccttc
aaggtggccgaccgagaaggcctgttactgctggacctcaaggacctcaaggcgctgctg
gcgcacctgaaggacaacccgcaattgctgggtgaagacagtgcactcatgaccacggcc
tcgacccaagccttgttgcggcggctggcgaccctggagcagcagggcgccgaggcgctg
tttggcgagccggcattgcagcttgaagacctgctgcggccgggctcggatggccgtggg
cgcattcacctgctcgacgccagccggctggtgcatgaggcgcccaaggtgtacgccacc
ttcctgctgtggctgctggccgagctgttcgagcaattgcccgagcgtggagatgccgac
aagccggtgctggccttgttcttcgatgaagcgcacttgctgttcaacggtacgcccaag
gcgctgcaggatcgcctggagcaggtggtgcggctgatccgctccaagggcgtgggggtg
tacttcgtcacccagtcaccgggtgacttgccggatgcggtgctggcccagttggggttg
cgcattcagcatggcctgcgagcctttaccgccaaggagcagaagtcgctgagggcagtg
gccgatggctttcgcccgaaccccgcgttcgaaaccctggcggtgctgaccgagctgggg
attggcgaggcgctggtggggacactggaagagaagggtacgcctgccatggtgcagcgg
gtgctgattgcaccgccgcagtcgcgtatcgggccgctgagtgcggccgagcgcagtgcg
ctgattgccgcttcgccgctggcggggcgctatgacaagccggtggaccgtgagtcggcc
tatgaaatgctgacccagcgcaagggcgaggcggtggagccagccccgcagccgcaggcg
gatggggagagctttgccgacaaggccggtgacttcctgcagagtgcggcggggcaggct
atcaagtcggctgtgcgtcaagccgccaaccagttggggcgacaactggtgcgcgggttg
atggggtcgttgctggggggcaagaaaaggtag
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