Pseudomonas putida NBRC 14164: PP4_09640
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Entry
PP4_09640 CDS
T02707
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PP4_09640 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppun03400
]
PP4_09640 (ung)
Enzymes [BR:
ppun01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PP4_09640 (ung)
DNA repair and recombination proteins [BR:
ppun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PP4_09640 (ung)
Prokaryotic type
PP4_09640 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAN52817
UniProt:
A0ABM7EAB8
LinkDB
All DBs
Position
1110647..1111339
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AA seq
230 aa
AA seq
DB search
MTDDDRIKLEPSWKAALRAEFDQPYMHQLREFLRSERAAGKEIYPPGPLIFNALNSTPLD
QVKVVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKEMQRDLNIPIASHGYLQSWA
EQGVLLLNTTMTVERANAASHAKKGWEFFTDRVIQVVSEQCPNVVFLLWGAHAQSKQKLI
DGTKHLVLKSVHPSPLSAYRGFLGCGHFSRTNSFLEQRGLPPINWAVPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacgatcgcatcaaactcgaacccagctggaaagccgcattgcgtgctgaa
ttcgaccagccctacatgcatcaactgcgcgagttcctgcgcagcgagcgtgccgccggc
aaggaaatctacccgccagggccgctgatcttcaatgcgctgaactcgacgccgctggac
caggtgaaggtggtgatactcgggcaggacccctaccacgggccaggccaggcgcacggc
ctgtgcttttcggtacagccgggcgtggccacgccgccgtcgctggtcaatatctacaag
gaaatgcagcgcgacctgaacatcccgatcgccagccacggctacctgcaaagctgggcc
gagcagggcgtgctgctgctcaacaccaccatgaccgtggagcgggccaatgcggcgtcg
catgccaagaagggttgggagttctttaccgatcgggtgatccaggtggtcagcgagcag
tgcccgaacgtggtgttcctgttgtggggggcacatgcgcaaagcaagcagaagctgatc
gacgggaccaagcatctggtgctgaagtcggtgcatccgtcgccgttgtcggcttaccgc
gggttcctggggtgtgggcatttcagccggaccaacagcttcctcgaacaacgtgggctg
ccgccgatcaactgggcggtgccaccgctctaa
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