Pseudomonas putida NBRC 14164: PP4_10850
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Entry
PP4_10850 CDS
T02707
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ppun
Pseudomonas putida NBRC 14164
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppun03021
]
PP4_10850 (rapA)
Transcription machinery [BR:
ppun03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PP4_10850 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAN52938
LinkDB
All DBs
Position
complement(1247503..1250349)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DQITHFEGWKLTVREVDDIDGLMVYHGLDGQNQPRTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYNTLQHTSKQMQSALWGLGGCRAQPIAHQLHIAREVADRSAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVDDEKAQDALFAAGWDMMVVDEAHHLVWHEDQVSAEYGLVEQL
AQVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESEHYRPVAEAVQELLDE
GRLSPKAHATIQGFLGAEGEALLAAVSDGDSQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLATPEQYRDLPAGEHAELYPEVAFQAQGDVADDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPASVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHIPYLLGSP
QERLFQWYHEGLNAFLNTCPTGNALQHQFGPRLLSLLEGGESKAWDSLVDDARSERERLE
AELHTGRDRLLELNSGGAGEGQALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRAQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLFVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLASRVAF
ETLNEQLESVPRASANKFVQAQRDVLAKRISGGEEKIMPTHVERVAEAQRRLAAEADEEL
ARLVALQAVNPSVRDSEIDALRKQREDGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaagcagagctcggc
ctgggtaccatcctggcgcaggatggccgcctgttgaccgtgctctacccggccactggc
gacacacgccagtattccctgcgcaacgcgccgctgacccgcgtgcgcttctcgccaggt
gaccagatcacccacttcgagggctggaagctgaccgtgcgcgaagtcgacgacatcgac
gggctgatggtctaccacggcctggacggtcagaaccagccgcgtaccctgccagaaacc
cagctgtcgaacttcatccagttccgcctggcaagtgaccggctgtttgcagggcaaatc
gaccccctgtcgtggttcagcctgcgctacaacaccctgcagcacaccagcaagcagatg
cagtcggcgctatggggcctgggtggctgccgcgcgcaaccaatcgcccaccagttgcac
atcgctcgcgaagtcgccgaccgcagcgccccgcgggtactgctggccgacgaagtgggc
ctgggtaaaaccatcgaggccggcctggtgatccatcgccaactgctctcgggccgcgcc
agccgcgtgctgatcctggtaccggaaaacctccagcaccagtggctggtggaaatgcgc
cgccgcttcaacctgcaagtggccctgttcgatgccgagcgctttatcgaaagcgacgcc
agcaacccgttcgaggatgcccagctggcgctggttgcactggaatggctggtcgacgac
gaaaaggctcaggacgcattgtttgccgctggctgggacatgatggtcgtcgacgaggcc
caccacctggtctggcacgaagaccaggtcagcgccgaatacggcctggtcgagcaactg
gcccaggtgatcccgggcgtgctgctgctcaccgccacccccgagcagcttggccaggac
agccacttcgcccgcctgcgcctgctcgaccccaaccgcttccacgacctggccgccttc
cgcgccgaaagcgagcactatcgcccggtggctgaagccgtgcaggagctgctcgatgaa
ggccgcctgtcgccaaaggcccacgccaccatccagggtttcctgggtgccgaaggcgaa
gccctgttggctgcagtcagcgacggcgacagccaggccagcgcacgtctgatccgcgag
ctgctggaccgccacggcaccggccgcgtcctgttccgtaacacccgtgcggcgatccag
ggcttccccgagcgccagttgcacccttacccgctggccacacccgagcagtaccgcgac
ctgccagccggcgagcacgccgagctgtacccggaagtcgccttccaggcccagggtgat
gtggctgacgacgagcgctggtggcgtttcgacccgcgcgtcgactggctgatcgacacc
ctgaagatgctcaagcgcaccaaggtactggtcatctgcgcgcacgccgaaaccgccatg
gacctggaagacgccctgcgcgtgcgctccggcatcccggcctcggtgttccatgaaggc
atgaacatcctcgagcgcgaccgcgccgccgcctacttcgccgacgaagaattcggtgcg
caagtgctgatctgctccgagatcggcagcgaaggccgcaacttccagttcgcccatcac
ctggtgatgttcgacctgccagcacacccggacctgctcgaacagcgcatcggccgcctc
gaccggatcggccagaagcacaccatccagttgcacatcccgtacctgctaggcagcccg
caagagcgcctgttccagtggtaccacgaaggccttaacgccttcctcaacacgtgcccc
accggcaacgcccttcagcaccagttcggcccacgcctgctgtcgctgcttgaaggtggc
gagagcaaggcctgggattccctggtggacgacgcccgcagcgagcgcgagcgcctggaa
gccgaactgcacactggccgcgaccgcctgctggagctcaactccggcggtgccggcgaa
ggccaggcgctggtcgaggccattctcgaacaggacgaccagtttgccctgccgatctac
atggaaaccctgttcgacgccttcggcatcgacagcgaagaccattccgagaacgccctg
atcctcaagccgagcgaaaagatgctcgatgccagcttcccgctgggcgacgacgaaggc
gtgaccatcacctacgaccgtgcccaggcgctgtcgcgcgaggacatgcagttcctcacc
tgggagcacccgatggtgcagggcggcatggacctggtgctgtccggctctatgggcaac
accgccgtggcactgatcaagaacaaagcactcaagccgggcaccgtcctgctcgaattg
ctgttcgtcagcgaggtggtggcaccacgcagcctgcagctgggccgctacctgccgccg
gccgcactgcgctgcctgctcgacgccaacggcaacgacctggcctcccgcgtggctttc
gaaaccctcaacgagcagctcgagagcgtaccgcgtgccagcgccaacaagttcgtccag
gcccagcgggacgtgctcgccaagcgcatcagtggcggtgaagagaagatcatgccgacg
cacgtcgagcgcgtagccgaagcgcagcgccgtctggcagccgaggccgacgaagagctc
gcccgcctggtggcactgcaagcggtcaacccaagcgtgcgcgacagcgaaatcgacgcc
ctgcgcaagcagcgtgaagacggcctggcgatgctggacaaggccgccttgcgcctggag
gccattcgcgtgctggtggctggctga
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