Pseudomonas putida NBRC 14164: PP4_14250
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Entry
PP4_14250 CDS
T02707
Symbol
fliA
Name
(GenBank) RNA polymerase sigma-28 factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun02020
Two-component system
ppun02025
Biofilm formation - Pseudomonas aeruginosa
ppun02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PP4_14250 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PP4_14250 (fliA)
09142 Cell motility
02040 Flagellar assembly
PP4_14250 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppun03021
]
PP4_14250 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppun02035
]
PP4_14250 (fliA)
Transcription machinery [BR:
ppun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PP4_14250 (fliA)
Bacterial motility proteins [BR:
ppun02035
]
Flagellar system
Flagellar assembly proteins
Stator
PP4_14250 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_30
GerE
MarR_2
Glyco_tranf_2_4
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
BAN53278
UniProt:
A0ABN5UIG1
LinkDB
All DBs
Position
1658025..1658765
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AA seq
246 aa
AA seq
DB search
MNASGFKMYSRAAKDAQYELIERYAPLVKRIAYHLLARLPANVQVEDLIQAGMIGLLEVS
SKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAMRAVEARTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASGHVEPARGLEDE
RFQAALTEAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRSRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggcttcaagatgtacagccgggcggcgaaagacgcccagtacgagctg
atcgaacgctacgccccgctggtgaagcgcattgcctaccacctgttggcgcgtttaccg
gccaacgtgcaggtcgaggacctgatccaggccggcatgatcggcctgcttgaagtgtcc
agcaaatatgacgccagcaaaggcgccagctttgaaacctatgccggcatccgcatccgc
ggggccatgctggacgaggtgcgcaagggcgactgggcaccgcgttcggtgcaccgcaac
acccgcatggtaagtgacgcgatgcgtgccgttgaagccagaacaggccgggacgctaaa
gatcatgaagttgctgccgaactccaattgagtctcgatgattactacgggatcttgaac
gataccttgggcagccgtctgttcagctttgacgacctgttgcaggacggcgagcacgaa
gggctgcatgaggatggcgccagtggccatgtcgaacctgcgcgtggcctggaggacgaa
cgcttccaggctgccctgaccgaggccattgccaacctgccggagcgtgagcgcctggtg
ctggcgctgtactacgacgaagagctgaacctcaaggaaatcggcgaggtgcttggggtc
agcgagtcgcgggtcagccagttgcacagccagtgcgccgcgcgcctgcgtagccgcctg
ggggaatggcgggcacgttga
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