Pseudomonas putida NBRC 14164: PP4_15030
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Entry
PP4_15030 CDS
T02707
Symbol
dnaX
Name
(GenBank) DNA polymerase III gamma/tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun03030
DNA replication
ppun03430
Mismatch repair
ppun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP4_15030 (dnaX)
03430 Mismatch repair
PP4_15030 (dnaX)
03440 Homologous recombination
PP4_15030 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppun03032
]
PP4_15030 (dnaX)
03400 DNA repair and recombination proteins [BR:
ppun03400
]
PP4_15030 (dnaX)
Enzymes [BR:
ppun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PP4_15030 (dnaX)
DNA replication proteins [BR:
ppun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PP4_15030 (dnaX)
DNA repair and recombination proteins [BR:
ppun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PP4_15030 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
ResIII
AAA_14
AAA_30
TIP49
PIF1
AAA_18
AAA_16
AAA_19
AAA_2
TsaE
nSTAND3
AAA_7
HasA
Rad17
SKI
zf-CXXC
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
BAN53356
LinkDB
All DBs
Position
1740093..1742168
Genome browser
AA seq
691 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQAHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSTHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMSP
ERVVEHLSHVLAAENVPFEPDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGSLDHGQVYGVLQALLEGDARALLEAVRNLAEQGPDWAGVLAEMLNVLHRVAIAQALPE
AVDNGQGDRERVLALASALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADTDDAPKPVLKPVGISQATADPAAPVAASASAGPSSSVATVPAELVAAAPQLEVPAPAT
ADHEPEAEPDVELQAEIEAISVPEPVAEVVDLPWEEPAAAPAPVAAEPVPTPAPAPEPVA
PVPAPQATATHDEPPFDPSAYAAVGMDRDDEPPLDEDYYGGESDPVGFSYLDELAEHVQE
DVSKPAAEPLPAAKPATGLALQWLELFPQLPVSGMTGNIAANCTLIAADGDDWLLHLDPG
QGALFNTTQQRRLNEALNQHLGRTLNLRIELILPEQETPAQAASRKRAERQQDAVTSIEQ
DPLIQQMIKLFGAKVRQDTIEPVEALAKQGQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
caggcccatgtgctgaaggccttgatcaatgccttggacaatcagcgcctgcaccatgct
tacctgttcaccggtacccggggcgtgggcaagacgaccatcgcccgtattatcgccaag
tgcctgaactgtgagaccggcatcacctccacgccgtgcggcacctgttcggtgtgccgt
gaaatcgacgaaggccgcttcgtcgacctgatcgagatcgacgccgccagccgcaccaag
gtcgaggacacccgcgaactgctggacaacgtgcagtacgccccgagccgtgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctcgacccactcgttcaacgccttgctc
aagacgctggaagagccgccgccctacgtcaagttcatcctcgccaccaccgacccgcag
aagctgccggccaccatcctgtcgcgctgcctgcagttctcgctgaagaacatgagcccg
gagcgggtggttgaacacctcagccacgtactggctgccgaaaacgtgccgttcgagccg
gatgccctgtggctgctgggccgtgcggccgatggctcgatgcgtgacgccatgagcctt
accgaccaggccatcgcctttggcgaaggcaaggtgctggccgcggatgtgcgggccatg
cttggtagccttgatcatggccaggtctatggcgtgttgcaggcgttgctcgaaggcgat
gcccgggcattgctggaggccgtgcgcaacctggccgagcagggcccggactgggctggg
gtgctggccgaaatgcttaacgtgctgcaccgtgtggctattgcccaggcgctgcctgaa
gcggtggacaacggccagggcgaccgtgagcgggtgctggcgctggcttcggccttgccg
gccgaagacgtgcagttctattaccagatgggcctgatcggtcgccgagacctgccgttg
gcgccagacccgcgtggtggcttcgagatggtcctgctgcgcatgctggcgttccgcccg
gccgatactgacgatgcgccgaaaccggtgctaaagccagtggggatcagccaagccaca
gctgatcctgcagcgccggtggcagcctcggcgtcggccgggccctcatcgtctgtcgcg
accgtaccggcagagcttgtagcggccgccccacagctggaagtgcctgcacctgcgaca
gccgaccatgagccggaggccgagccagatgttgagctgcaggccgagatcgaggccatt
tccgtacccgagcctgttgcggaggtggtcgaccttccgtgggaagagccggcagcggca
cccgcgccggtagccgctgaacctgtgcctacacccgcacctgcgcccgagcctgtagcc
cctgtgccggcaccacaggccaccgcgacccacgacgagccgcctttcgacccctccgcc
tacgcagccgtaggcatggatcgcgacgatgagccgccgctggacgaagactattacggt
ggtgaaagcgacccggtcggtttcagctacctggacgagttggccgaacatgttcaggag
gacgtgtccaagcctgcggccgaaccgctgccggcagccaagccggccaccgggctggcc
ctgcaatggctggaattattcccacagttgcctgtgtccgggatgacaggcaacatcgcg
gcaaactgtacgctgattgccgccgatggcgacgattggctgctgcacctggaccctggc
cagggcgcgctgttcaacacgacccaacagcggcgcctgaacgaagcgcttaaccagcac
ctggggcgcacgctgaacctgcggatcgagctgatcctgcccgaacaggaaaccccggcc
caggcggcatcgcgcaagcgcgcagagcgccagcaggacgccgtaacctcgatcgagcag
gatccgttgatccagcagatgatcaagttgttcggtgccaaggtgcggcaggatactatt
gagcctgtagaggccctggccaaacagggccagtaa
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