Pseudomonas putida NBRC 14164: PP4_18510
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Entry
PP4_18510 CDS
T02707
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppun
Pseudomonas putida NBRC 14164
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppun03032
]
PP4_18510
03400 DNA repair and recombination proteins [BR:
ppun03400
]
PP4_18510
Enzymes [BR:
ppun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PP4_18510
DNA replication proteins [BR:
ppun03032
]
Prokaryotic type
DNA Topoisomerases
PP4_18510
DNA repair and recombination proteins [BR:
ppun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PP4_18510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BAN53704
LinkDB
All DBs
Position
complement(2120330..2121352)
Genome browser
AA seq
340 aa
AA seq
DB search
MLDCPLPRSLHYVDDSQPGLTRRRWRDRFIYLDADGQRVRDSATLARIAALVIPPAYTDV
WICTDPQGHLQATGRDARGRKQYRYHTQWRELRDQHKYGRMLAFAEALPKLRAQLETHLA
RPGLDREKVMALVVSLLDHTLIRIGNQRYLRDNQSYGLTTLRNRHVQVKGSSIRFQFRGK
RGVEHDVTLTDRRLANLLKRCMELPGQALFQYLDENGQRHSIGSSEVNQFLQELTGADFT
AKDYRTWAGSSLALNLLRPLAWEPETEAKRQVAAIVRQVATRLGNTPAVCRRCYIHPAVL
EHYALGRLGNLPKRRMRKGLDPEEVALLLFLQALEEQDGH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactgccccctgccgcgcagcttgcactacgttgacgacagccagccgggcctg
acccggcgacgctggcgcgaccgcttcatttacctggatgccgatggccagcgggtgcgc
gacagcgccacccttgcgcgcatagccgcgctggtgattccgcctgcctacacagatgtg
tggatctgcaccgacccgcagggccatttgcaggcaaccggtcgcgatgcccgtggccgc
aagcagtaccgctaccacacgcagtggcgcgaactgcgcgaccagcacaagtacgggcgc
atgctggccttcgccgaggctttgccaaaactgcgcgcgcaactggaaacccacctggca
cggccaggcctggaccgggaaaaggtcatggcattggtcgtgagcctgctggaccacacc
ttgatccgcatcggcaaccagcgctacctgcgcgacaaccagtcctacgggctgaccacc
ctgcgcaaccgccatgttcaggtcaagggcagcagtatccgtttccagttccgcggcaag
cggggtgtcgagcacgacgtcaccctcaccgaccggcgcctggccaacctgctcaaacgc
tgcatggaactgcccggccaagcgctgttccagtacctggatgaaaacggccagcgccac
agcatcggctccagcgaggtcaaccagttcctgcaggagctgaccggcgccgacttcact
gccaaggactaccgcacctgggccggcagcagcctggccctgaacctgctcaggcccttg
gcctgggagcccgagaccgaggcaaagcgccaggtcgctgccatcgtccgccaggtggct
acacggctgggcaacacgcccgcggtctgcaggcgctgctacattcacccggccgtactt
gaacactatgccctggggcggctgggcaacttgccgaagcgccgtatgcgcaagggcctg
gaccctgaagaagtggccttgttgctatttcttcaggcacttgaggaacaggatggccat
taa
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integrated database retrieval system
