Pseudomonas putida NBRC 14164: PP4_22100
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Entry
PP4_22100 CDS
T02707
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ppun
Pseudomonas putida NBRC 14164
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppun03009
]
PP4_22100
Ribosome biogenesis [BR:
ppun03009
]
Prokaryotic type
ribosomal protein modification factors
PP4_22100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Sin3a_C
Motif
Other DBs
NCBI-ProteinID:
BAN54063
LinkDB
All DBs
Position
2508820..2511006
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AA seq
728 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
ARDIPTENIRLSQNNIVDPENRYNQIFKIQVELPEDISDKDRQGILRSIDRCTVKKVVQT
GPEFVIEVVENLDADAQGLLMPVADSSTYIPGKDLPLEQTIANMSGILAGLGMKIEIASW
RNIVPNVWSLHVRDAQSPMCFTNGKGATKEAALASALGEFIERLNCNFFYNDQFWGEELA
NAPFVHYPNEQWFKPGPRDALPAEILDEHCLEIYNPDGELRGSHLYDTNSGNTARGICSL
PFVRQSDQQVVYFPSNLIENLFLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGELCL
PDVPQEVLAKYPAIVAGIQGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASFGA
HPSLEVALERSLTELLQGRSFEGLNDLPQPTFESHALTEPNNFVEHFIDSSGVVSWRFFG
AKADFEFVEWDFSGHGEDSNVQEAATLFGILEDLGKEVYMAVYDNLGATACRILVPGYSE
IYPVEDLIWDNTNRALSFRADILNLHSLESRPLKLLLKRLDNCDVDDYTTITTLIGVEFD
ENTVWGQLTILELKLLICLAVQRFEEAKELVEAFLQFNDNTVERGLFYQALNVVLEVQLD
DELEMDDYEANFRRMFGNARMDAVLGSLDGSVRFHGLTPTSMKLEGLDRHLRLIESYKKL
HAARAKFA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaattttctcgacaatctccgtctcgaagccaagttcgacgacttc
acggtgatcgccgaccaaccgatccgctacaaaggcgatggttcggccccaggcccgttc
gactatttcctggcgtcttcggccttgtgcgcggcttacttcgtcaagctgtactgccag
gcccgcgacatccccaccgagaacatccgcctgtcgcagaacaacattgtcgacccggaa
aaccgctacaaccagatcttcaagatccaggtcgagctgcccgaggacatttcagacaag
gaccgccagggcatcctgcgctcaatcgaccgctgcacggtcaagaaggttgtgcagacc
ggccctgaattcgtgatcgaagtggtcgaaaacctcgatgccgacgcccagggcctgttg
atgccggtggcggacagcagcacctacatcccaggcaaagacctgccgctggagcagacc
atcgccaacatgtcgggcatcctcgccgggctggggatgaagatcgagatcgcttcgtgg
cgcaatatcgtgcccaatgtgtggtcgctgcacgtgcgcgacgcgcagtcgccaatgtgc
ttcaccaacggcaagggcgcgaccaaggaagcggcgctggcctcggcgctgggcgaattc
atcgagcgcctgaactgcaacttcttctacaacgaccagttctggggcgaggagctggcc
aacgcgccgttcgtgcactacccgaacgagcagtggttcaagcctggcccgcgcgacgcg
ctgccggccgagatcctcgacgagcattgcctggaaatctacaacccggacggtgagctg
cgcggttcgcacctgtacgacaccaactcgggcaatactgcgcgcggcatctgctcgctg
ccgttcgtccgccagtccgaccagcaggtggtgtacttcccgtccaacctgatcgaaaac
ctgttcctgagcaacggcatgagcgccggcaataccctggccgaggcgcaggtgcaatgc
ctgtcggaaatcttcgagcgcgccgtgaagcgcgaaatcctcgaaggcgagctgtgcctg
ccggacgtgccgcaggaagtgttggccaagtacccggccattgtcgccggtattcagggc
ctggaagagcagggcttcccggtgctggtcaaggatgcctcgctgggtggcgagttcccg
gtcatgtgcgtgactttgatgaacccgcgcaccggtggcgtcttcgcctcgttcggtgcc
cacccgagccttgaagtggcgctggagcgcagcctcaccgagttgctgcagggccgcagc
ttcgaaggcctgaacgatctgccgcagccgaccttcgagagccatgcgctgaccgagccg
aacaacttcgtcgagcacttcatcgactccagcggcgtggtgtcgtggcgcttcttcggc
gccaaggccgacttcgagttcgtcgagtgggacttctccggccatggcgaggactccaat
gttcaggaggccgcaaccctgttcggcattctcgaagacctgggcaaggaagtgtacatg
gcggtgtacgacaaccttggcgccactgcctgccgcatcctggtgccgggctactcggaa
atctacccggtcgaggacctgatctgggacaacaccaaccgcgccctgtcgttccgcgcc
gacatcctcaacctgcacagcctcgaaagccgccccctcaagttgctgctcaagcgcctg
gacaactgcgatgtggatgactacaccaccatcaccacgctgattggtgtggagttcgac
gagaacaccgtgtggggccagctgaccattctcgagctgaaactgctgatttgcctggcg
gtgcagcgttttgaggaggccaaggagctggtcgaggcattcctgcagttcaacgacaac
accgtcgagcgtggcctgttctaccaggcgctgaacgtggtgctggaagttcagctggat
gacgagctggagatggatgattacgaagccaacttccgccgcatgttcggcaatgcgcgc
atggacgcagtattgggttcgctagacggcagcgtgcgtttccatggcctgaccccgacc
agcatgaagctcgaaggccttgatcgccatctgcgcctgatcgagagctacaagaagctg
cacgcagcccgggccaaattcgcctga
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