Pseudomonas putida NBRC 14164: PP4_22490
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Entry
PP4_22490 CDS
T02707
Name
(GenBank) putative RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PP4_22490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppun03021
]
PP4_22490
Transcription machinery [BR:
ppun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PP4_22490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
BAN54102
UniProt:
A0ABN5UL46
LinkDB
All DBs
Position
2559939..2560451
Genome browser
AA seq
170 aa
AA seq
DB search
MIDAAPPPEPSLPALYREHRSWLETWLRRRLGNAWDAADLSQDTFLRVLTSAQPLADIRE
PRAYLLTVGKRLLSNFYQRRSLEQAYLDALAHLPEQHVPSPEQRWVLLETLQALDELLDG
LKAPVRKAFLWSQLEGLGYAEIGKRLGVCERSVKRYMAQAYEHCLLVELQ
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgccgcgccgccaccggagcctagcttgcctgccctgtaccgggagcatcgc
agctggcttgaaacctggctacgccggcgcctgggcaatgcctgggatgccgccgacctc
agccaggataccttcctgcgggtattgaccagtgcccagccattggcagacattcgtgag
ccacgcgcctacttgctgaccgtgggcaagcggctgttgagcaacttctaccagcggcgc
agcctggagcaggcctaccttgatgccctggcgcatctgcccgagcagcacgtgccctcg
ccagagcagcgctgggtgttgctggaaaccctgcaagccctggatgagctgctcgatggc
ctgaaggcgccggtgcgcaaggcctttctatggagccagctcgaaggcctgggttacgcc
gaaataggcaagcgcctgggcgtttgcgaacgctccgtcaaacgttacatggcgcaggcc
tacgaacattgcctgctggtcgagttgcaatga
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