Pseudomonas putida NBRC 14164: PP4_24430
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Entry
PP4_24430 CDS
T02707
Symbol
hcp
Name
(GenBank) putative type VI secretion system effector Hcp
KO
K11903
type VI secretion system secreted protein Hcp
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun02025
Biofilm formation - Pseudomonas aeruginosa
ppun03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PP4_24430 (hcp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PP4_24430 (hcp)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppun02044
]
PP4_24430 (hcp)
Secretion system [BR:
ppun02044
]
Type VI secretion system
Imp/Vas secretion system core components
PP4_24430 (hcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_HCP
Motif
Other DBs
NCBI-ProteinID:
BAN54296
LinkDB
All DBs
Position
complement(2780538..2781056)
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AA seq
172 aa
AA seq
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MAFDAYIQIDGIPGEVLDDKHKDWIEVLGYEYGATQATSATASSSGGASSERVALSDFKI
RKAVDKASAKLFEHCCTGKHIAKLKLNVNRAGGDKVTYLTIDMEEVVVSSVKFVAGGNQG
GEDKAVSDLPIEEISFNFARIKTTYTQQNRTDGQAGGNIVGGWDRTANKVFA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgacgcgtatatccaaatcgacggcatcccgggcgaagtactggatgacaaa
cacaaggactggatcgaagtgctgggctacgagtacggcgccacccaggctacctcggca
actgccagctcctcgggtggtgcgtcgtccgagcgtgttgccctgagcgacttcaagatc
cgtaaagccgtcgacaaggcttcggccaagctgttcgagcactgctgcaccggcaagcac
atcgccaagctgaaactgaacgtgaaccgtgcaggtggcgataaagtcacctacctgacc
atcgacatggaagaagtcgtggtctcgtcggtgaagttcgttgccggtggcaaccaaggg
ggtgaagacaaggccgtcagcgacctgccaattgaagaaatcagcttcaactttgcccgt
atcaagaccacctacacccagcagaaccgcaccgacggtcaggccggcggcaacatcgtc
ggtggctgggaccgcaccgcgaacaaagtgtttgcctaa
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