Pseudomonas putida NBRC 14164: PP4_24540
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Entry
PP4_24540 CDS
T02707
Name
(GenBank) hypothetical protein
KO
K11900
type VI secretion system protein ImpC
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PP4_24540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppun02044
]
PP4_24540
Secretion system [BR:
ppun02044
]
Type VI secretion system
Imp/Vas secretion system core components
PP4_24540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
TssC
TSP_NTD
Motif
Other DBs
NCBI-ProteinID:
BAN54307
UniProt:
A0ABM7EEK6
LinkDB
All DBs
Position
complement(2797182..2798684)
Genome browser
AA seq
500 aa
AA seq
DB search
MTDKQTAPQQAGELVEVENFAPQPSLLDSIISQSRVARSDTERNRTRDLIGELVNQVLEG
EMTPSKDLIAVLDSRIAEIDSMLSEQMNEIMHAREFQQLEASWRGLKYQVDQTETSTTLK
IHLLNASKKDLVRDLKAASEFDQSALFKKVYEEEYGTFGGAPFGMLIGDYEFNRNPEDMY
LLEEISHVAASAHAPFISAASPELFGWDSFTEMSGPRDLANLFDTVEYAKWKSFRASEDS
RYVGLTLPHVLGRLPYGPDTTPVEEFNFVESVDGRDHNKYLWMNAAYALGTRVTDAFARY
GWCVAIRGVEGGGLVEGLPTHTFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCK
GTDYAAFFGTQSAQKQKQYNTDIANANARLSAQLQYIFATSRIAHYMKAIMRDKIGSFAS
RMDVERFLNQWLASYVLLDDTASQEAKAKFPLREARAEVFEVPGKPGVYKAVTYLRPHYQ
LDELTASLRLVAELPQGARG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaagcaaaccgcaccgcaacaggccggcgaactggtcgaagtagaaaacttc
gcgccacagccctcactgctggacagcatcatttcgcaaagccgcgtggcccgttccgac
accgagcgcaaccgcacccgcgacctgattggcgaattggtgaaccaggtgctcgaaggt
gagatgacgccgagcaaagacctgatcgccgtgctcgactcgcgtatcgccgagatcgat
tcgatgctctccgagcagatgaacgagatcatgcacgcccgcgagttccagcagctggaa
gcctcctggcgcggcctgaaataccaggtagaccagaccgaaaccagcaccacgctgaag
atccacctgctcaacgcctcgaagaaggacctggtacgtgacctgaaggccgccagcgaa
ttcgaccagagcgcgctgttcaagaaagtctacgaagaagaatacggcactttcggtggc
gcgccgttcggtatgctgatcggtgactacgagttcaaccgcaaccccgaagacatgtac
ttgctggaagagatctcgcacgtggcagcgtcggcgcatgcaccgttcatctccgccgcc
tcccccgagctgtttggctgggactcgttcaccgagatgtccggcccgcgtgacttggca
aatctcttcgacaccgtcgaatacgccaagtggaagtcgttccgcgcctcggaagactca
cgctacgtcggcctcaccctgccccacgtgctcggccgcctgccatatggccctgatacc
acgccggtggaagaattcaacttcgtcgaaagcgtcgacggccgcgaccacaacaagtac
ctgtggatgaacgccgcctatgccctcggcacccgcgtcaccgatgctttcgcccgctac
ggctggtgcgtggccatccgcggcgtagaaggtggcggcctggtcgaaggcttgccaacc
cataccttcaagaccgacgacggcgaaatcgccctcaagtgcccgaccgagatcgccatc
accgaccgccgcgaaaaagagctgtcggacctgggcttcattcccctggtgcactgcaag
ggcaccgactatgccgcgttcttcggcacccagtcggcgcagaagcaaaagcaatacaac
accgacatcgccaacgccaacgcacgcctgtcggcccagctgcagtacatcttcgccacg
tcgcgcatcgcccattacatgaaggcaatcatgcgcgacaaaatcggcagcttcgcctcg
cgcatggacgtggagcgcttcctcaaccagtggctggccagctacgtgctgctggacgac
accgccagccaggaggccaaggccaagttcccgctgcgcgaagcccgcgccgaggtgttc
gaggtaccaggcaagccaggcgtgtacaaggctgtaacctacctgcgcccgcactaccag
ctcgacgaactgaccgcctcgctgcgcctggtcgccgaactgcctcaaggggcgcgcggc
tga
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