Pseudomonas putida NBRC 14164: PP4_24690
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Entry
PP4_24690 CDS
T02707
Name
(GenBank) putative Rhs family protein
Organism
ppun
Pseudomonas putida NBRC 14164
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
PAAR_motif
RHS
TEN_YD-shell
DUF6156
GH-E
Motif
Other DBs
NCBI-ProteinID:
BAN54322
LinkDB
All DBs
Position
2810442..2814641
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AA seq
1399 aa
AA seq
DB search
MFEAARFGDEISHTSALGGFLIGAALGIALVATVAIATFTCGFGVALLAGLAAGIGGSLL
TAAGEAIGSMFSSPSGTITTASPNVFINSRKAARVEKSIGACDKHPGPVQIAEGSTNVFI
NSVAAARKGDKLTCGATISGGSDNVIIGGGTHRYLPVDDEVPEWLRTTVDVLMAIAGAAG
GIAQLIKAGSQAGMKAIMPCALKFTAGFVAGEVASRYVVEPVARKAIGGLVGNPVDLTTG
RKLIPDEIDFSLPGLMPIEWSRFYASDLTVDSVLGRGWVLPWEQSLRRQGAFIYLTDNQG
REVPFVTLQPGERIYNPHEQVYLVCTEGGHYILQTLDNLFFYFGEVPDTNTEVPLQRIEN
ALGHFLHFTRTPDGTLTDISATGGTRVHLHYDNPLGRLTDIKRVVNNEAVETLTQYRYDE
HGQLSAVINRNGDTVRSFSYADGLMVTHSNALGLGCHYRWQTLGDKPRVVEHWTSDGEHY
HFRYDLDSRTSWATDVLGRELQVQYNADHRVVASRDYGGERYAIELDEQGNMVGLDLPDG
NRLAFKYDEYARLLEETDPLGRKIQYEYHHLTTLVTKVSYPDGSTWQARYDDKGNLLAEI
DALGQMTEYLNSDDGLPHTIIDATYKSKYLWWNTLAQVERYQDCSGKSTYYRYDERQHLV
AVTDALNQTTTLERKPDGEVQRISHPDGTTETFTYNVYGQVLSHTDGKGQTTRLMRTARG
LPSSRQDGKGQRVRYEYDKAIRLTALVNENNATYSFAYDVSDRLSEEVRVDNLTRRFSYN
VGGHLTRLDEIGYGENAERPERHTLFERDAIGRLIAKLNSDAQQRFTYDDGDRLLSIERQ
PTGIGKQLGITEEKLEYAYDLLGRLTKEITPDGTLGYEYDPLSNLTTLTLPDGRKVNHLY
YGSGHLHQLNLDGLVISDMERDDLHREVYRTQGKLTSCFGYDAMGRKAWQFASTLSADKL
SQVHNTGVNTSLLVEHAYNPIHRRYQYDPAGELVRTLDKLRGEIKYEYEANGQLRSRDTG
SLVGSEEFRYDPAANRLDFNARQFDKVKDNRIKQWRDQEYRYDPWGNLIEKRSGHSKLQS
FSYDCENRLVRAETLVNGKLESRGEYRYDSLGRRVAKQAEINGITEQKRFLWQGLRMLRE
ETPGQSILYLYEPGSYAPLARVDQVEGEGQKLYYFHTDQIGTPLELTDSEGGIVWQATFR
SWGAIEQLTVNEVEQNLRFQGQYFDVEAELHYNTFRYYDPEIGRFISHDPISLLGGDNLY
IFAPSTTGWIDPWGLSCRTEYLGRTPGKSSRTGRKVIENMRGEGRIRGKGDSMEFKSSTD
KQWYPVREADMAHKYDAVTYWNDRGGFFGAKSKEVRKWMLDPKNYELEHYSYNRSAGAKL
NQFYRSPDNIVGPHESFQY
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaagcggccaggttcggcgacgagatatcgcacaccagcgcgttggggggcttc
ctgattggcgccgccctgggtatagcgctggttgccacggtggcgatcgccacgttcacc
tgcgggtttggcgtggcgttgctggccggtcttgcagctggtattggaggcagcttgctg
accgctgccggagaggcgataggcagtatgttctcgtccccttcagggacgataaccact
gcctcacccaatgtattcatcaacagccgcaaggctgcgcgtgttgaaaaaagcattggc
gcctgcgacaaacacccggggccggtgcaaattgccgaaggctcgaccaatgtattcatc
aacagcgtggccgctgcgcgcaagggcgacaagctgacctgcggcgcgaccatttccggt
ggttctgacaacgtcatcatcggcggcggcacccaccgctacctgcccgtggacgatgaa
gtcccggagtggctgcgcaccaccgtggatgtgctgatggccatcgccggtgccgcaggc
ggtattgcccagctgatcaaggccggtagccaagccggcatgaaagccatcatgccttgc
gcgctaaagttcactgccggcttcgtcgccggtgaagtggccagccgctacgtggtcgaa
cccgtggcccgcaaggcgatcggcggcctggtcggcaacccggtcgatctcaccacgggc
cgcaagctgatccccgatgaaatcgacttcagcctgccgggcctgatgccgatcgagtgg
tcgcgcttctacgccagcgacctgacggtcgacagcgtgctcggtcgcggctgggtgctg
ccctgggagcagagcctgcgccgccagggtgcattcatctacctcaccgacaaccaaggc
cgcgaagtcccgttcgtgaccctgcaaccgggcgaacgaatctacaacccgcatgagcag
gtgtacctggtgtgcaccgagggcggccactacatcctgcagaccctagacaacctgttc
ttctacttcggcgaagtgcccgacaccaacaccgaagtgccgctgcaacgcatcgagaat
gccctcggccacttcctgcacttcacccgcacgcccgacggcacgctgaccgacatcagc
gccaccggcggcacccgcgtgcacctgcactacgacaacccgctggggcgcctgaccgac
atcaagcgcgtggtcaacaatgaggcggtcgaaacgctcacccagtaccgctacgacgaa
cacggccagctgagcgcggtgatcaaccgcaacggcgacaccgtgcgcagcttcagctac
gccgacggcctgatggtgacccacagcaacgccctgggcctgggctgccactaccgttgg
caaaccctgggcgacaagccgcgcgtggtcgagcactggaccagcgacggcgagcattac
cacttccgctacgacctcgacagccgcaccagctgggccaccgacgtgctcggccgtgag
ctgcaagtgcagtacaacgccgaccaccgcgtggtcgccagccgcgactacggtggcgaa
cgctatgccatcgaactggacgagcagggcaacatggtcggccttgacctgccagacggc
aaccggctcgccttcaagtacgatgaatacgcccgcctgctggaagaaaccgatccactg
gggcgcaagatccagtacgagtaccaccacctgaccacgctggtgaccaaagtcagctac
ccggatggcagcacctggcaggcgcgctacgacgacaagggcaacctgctcgccgaaatc
gatgccctcggccagatgaccgagtacctgaacagcgatgacggcctgccgcacaccatc
atcgacgcgacctacaagtccaagtacctgtggtggaacaccttggcccaggtcgagcgt
tatcaggactgctcgggcaagagcacgtactaccgctatgacgagcgccagcacctggtc
gcggtaacggacgcgctgaaccagaccaccacgctggaacgcaagcccgacggcgaagtg
cagcgcatcagccacccggacggcaccaccgaaacctttacctacaacgtctacggccag
gtactcagccacaccgacggcaagggccagaccacccgcctgatgcgcacagcccgcggc
ctgccgagcagccgccaggatggcaagggccagcgggttcgctacgagtacgacaaggcc
attcgcctgaccgcactggtcaacgaaaacaacgccacgtacagctttgcctacgacgtg
tcggaccggcttagcgaagaagtacgggtggataacctgacccggcgcttcagctacaac
gtcggtggccatctcacacgactggatgagattggttatggcgagaatgccgaacggcca
gagcgtcatacgctgttcgagcgtgatgccattggtcgcctgatcgccaaactgaatagc
gacgcacaacagcgattcacctatgacgacggtgaccggttgctgagcatcgagcggcaa
ccgaccgggatcggcaagcagcttgggatcacggaagaaaagcttgagtacgcctacgat
ctgctcggtcggctgaccaaagaaatcacccctgacggcacgctcggctacgagtacgac
ccactcagcaacctgaccacgctaacgttaccggatgggcgcaaggtcaatcacctgtat
tacggcagcggccatctgcaccagttgaacctggacgggctggtgatcagcgacatggag
cgagacgacctgcaccgcgaggtgtaccggacccagggcaagctcaccagttgcttcggt
tatgacgccatggggcgcaaggcgtggcagtttgcgtcaaccttgtcggctgacaagctc
tcgcaggtgcataacactggcgtgaatacctcgttgctggtggagcatgcgtacaacccg
atccaccggcgttaccagtacgacccggccggtgaactggtgcgcaccctcgacaagctg
cgtggcgagatcaagtacgaatatgaagccaacggccagttgcgtagccgtgataccggc
tcgctggtaggcagtgaggagttccgctacgacccggcagccaaccgcctggacttcaat
gcgcggcagttcgacaaggtcaaggacaaccggatcaaacagtggcgggaccaggagtac
cgctacgatccgtggggcaacctgatcgagaagcgctcggggcacagcaagctgcagagc
tttagttatgactgcgagaaccggctggtgcgggcggagacgttggttaacggcaagctg
gaaagccgaggcgagtaccggtacgacagccttgggcggcgggtggccaagcaggcggaa
attaacggcatcaccgagcagaagcgcttcctctggcaggggctaaggatgctgcgggag
gaaacgccagggcagagcatcttgtacctgtacgagccgggaagctatgcgccgttggcg
cgggtcgatcaggtggaaggggaagggcagaagctttattacttccatactgaccagatt
ggtacgccgttggaattgacggatagcgagggtgggatcgtctggcaggcgacatttcgg
tcttggggggcgattgagcaactgacggtcaatgaagtcgagcagaatctacggttccag
ggccagtactttgatgttgaagcggagcttcattacaatacgttccgatattatgatcct
gaaattggacgatttatttctcatgaccctataagcttgctcggtggtgataatttatac
attttcgcacctagtaccactggatggattgatccttgggggctaagctgtcgaacagag
tatctgggcagaaccccgggcaaatctagcaggaccggccgaaaagtaattgaaaatatg
agaggcgagggtcgaattagaggtaaaggtgactcgatggaattcaaaagctcgaccgat
aagcagtggtatccggttcgagaggctgatatggcacataagtatgatgcggtaacatat
tggaatgatagaggtgggttctttggagctaagtctaaggaggttagaaagtggatgctt
gatccgaaaaactatgagctagagcattattcgtacaacaggtcggcaggtgcaaaattg
aatcagttttaccggtcgccagataatattgttggtccgcacgaaagttttcagtattga
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