Pseudomonas putida NBRC 14164: PP4_38580
Help
Entry
PP4_38580 CDS
T02707
Symbol
uvrB
Name
(GenBank) uvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PP4_38580 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppun03400
]
PP4_38580 (uvrB)
DNA repair and recombination proteins [BR:
ppun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PP4_38580 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PP4_38580 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
HAMP
AAA_22
RecG_N
Motif
Other DBs
NCBI-ProteinID:
BAN55711
UniProt:
A0ABM7EIM8
LinkDB
All DBs
Position
complement(4399067..4401082)
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRQMVEGIEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERRDAIIVTTVSCIYGLGSPESYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNEMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVFRKLPRF
TFYPKSHYVTPRETLLEAVEGIKEELKERLEYLHKANKLVEAQRLEQRTRFDLEMIMELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRMPSALDNRPMRFDEWEDVSPQTIFVSATPGPYEAEHSGRVVEQVVRPTGLVDPQ
VEIRPALTQVDDLLSEIRKRVALGERVLATTLTKRMAEDLSDYLADHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADNITGSMQRAIDETERRREKQVAFNEANGIVPKGVVKDITDIMEGATV
PGARSKKRKGMAKAAEESARYEAELRTPGEITKRIKQLEEKMMQFARDLEFEAAAQLRDE
ITQLRERLITS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttccagctcgtcacccgttttcagccggccggcgaccagcccgaggccatc
cgccagatggtcgaaggcatcgaggcggggctgtcgcaccagacgctgctcggcgtgacc
ggttcgggcaagaccttcagcatcgccaacgtcatcgcccaggtgcagcgtccgacgctg
gtgctggcgccgaacaagaccctggccgcgcagttgtacggcgagttcaaggccttcttc
cccaacaacgcggttgagtatttcgtttcctactacgactactaccagcccgaggcctac
gtgccgtcgtcggacaccttcatcgagaaggacgcctcgatcaacgaccacatcgagcag
atgcgcctgtcggcgaccaaggcgctgctggagcggcgcgatgcaatcatcgtcaccacc
gtgtcgtgcatctatggcctgggcagccccgagtcctacctgaaaatggtcctgcatgtg
gaccgcggcgacaagctcgaccagcgcgcactgctgcgccggctggccgacctgcagtac
acccgcaacgaaatggactttgcccgtgccaccttccgcgtgcgcggtgatgtgatcgac
atcttcccggccgagtcggaccttgaagccatccgcatcgaactgttcgatgacgaggtg
gagaacatcgccgccttcgacccgctcaccggcgaggttttccgcaagttgccacgtttc
accttctaccccaagagccactacgttaccccgcgggaaaccctgctggaggccgtggag
ggcatcaaggaagagttgaaggagcgcctggagtacctgcacaaggccaacaagctggta
gaagcacagcgcctggagcagcgcacccgtttcgatctggaaatgatcatggagctgggt
tactgcaacggcatcgagaactactcgcgctacctgtccgggcgcccggccggtgcgcca
ccacccaccctgtacgactacctgccagccgatgcactgctggtgatcgacgaatcccac
gtgagcgttccgcaggtcggtgccatgtacaagggcgaccgttcacgcaaggaaacactg
gtcgaatacggcttccgcatgccctcggcactggacaaccgtccgatgcgtttcgacgaa
tgggaggatgtcagcccgcagaccatcttcgtgtccgctaccccgggcccctacgaggcc
gagcattccgggcgcgtggtggagcaggtggtgcgtccgaccggcctggtagacccgcag
gtcgagatacgcccggcgctgacccaggtggacgacttgctgtcggaaatccgcaagcgc
gtggcgctgggcgagcgggtgctggccactacgctgaccaagcgcatggccgaggacctt
tctgattacctggccgaccacgatgtgcgggtgcgctacctgcactcggacatcgacacg
gtggagcgggtagagatcatccgcgacctgcgcctgggcaccttcgacgtgctggtgggc
atcaacctgctgcgcgaaggcctggacatgccggaggtttcgctggtggcgatcctcgat
gccgacaaggaaggcttcctgcggtcggagcgctcgctgatccagaccatcggacgcgct
gcgcgtaacctcaatggccgggccatcctgtacgccgacaacatcaccggctcgatgcag
cgggcaattgacgaaaccgagcgacgccgtgaaaagcaggtcgccttcaacgaagccaac
ggtatcgtgcccaagggcgtggtcaaggacatcaccgacatcatggaaggcgccaccgtg
cctggcgcgcgcagcaaaaagcgcaagggcatggccaaggcggcagaagagagcgcccgt
tacgaggccgagctgcgtacgccgggcgagatcaccaagcgtatcaagcagcttgaagag
aagatgatgcagttcgcccgcgacctggagttcgaagctgcggcgcagctgcgcgacgag
attacccagctgcgcgagcggttgattaccagctga
DBGET
integrated database retrieval system
