Pseudomonas putida NBRC 14164: PP4_40040
Help
Entry
PP4_40040 CDS
T02707
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppun
Pseudomonas putida NBRC 14164
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppun03032
]
PP4_40040 (gyrA)
03400 DNA repair and recombination proteins [BR:
ppun03400
]
PP4_40040 (gyrA)
Enzymes [BR:
ppun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PP4_40040 (gyrA)
DNA replication proteins [BR:
ppun03032
]
Prokaryotic type
DNA Topoisomerases
PP4_40040 (gyrA)
DNA repair and recombination proteins [BR:
ppun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PP4_40040 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
AAA_27
Motif
Other DBs
NCBI-ProteinID:
BAN55857
LinkDB
All DBs
Position
complement(4554713..4557478)
Genome browser
AA seq
921 aa
AA seq
DB search
MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPEVTIDELMQFIPGPDFPTAGIINGRQGIIEAYRTGRGRI
YMRARSEIEDIDKVGGRQQIVVTELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKD
GMRIVIELRRGEVPEVVLNNLYQQTQLQSVFGINVVALIDGRPRLLNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSA
VQVMVERAGADSCRPEDLPEQYGLHEGKYFLSPEQAQAILDLRLHRLTGLEHEKLLAEYQ
EILEQIGELIRILSSAERLMEVIREELEAIRAEYGDVRRTEILNASHDLNYGDMIPEEER
VVTISHGGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFSSKGKV
YWKKTYEIPEASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADLDEELEDADDTV
LEGELVEAEEVDEEDGDTAEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGLIALKL
KEGDTLIAAAITDGAKEVMMFSDAGKVIRFAESVVREMGRTARGVRGMKLGKGHQIISML
IPESGAQILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLVGAIQVQEGEEIM
LISDQGTLVRTRVGEVSSLSRNTQGVTLIKLAADETLVGLERIQEPSEDELDDVIETDEE
GVEAEAPDNEDAAGAEEAPQE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgaactgagacagtct
tacctcgactacgcgatgagcgtgattgtcgggcgagcgctgcccgatgcgcgtgacggc
ttgaagcccgtgcatcgtcgcgttctctatgcgatgagcgaactgggcaacgactggaac
aagccgtacaagaaatccgcccgtgtggtcggtgacgtgatcggtaagtaccacccgcac
ggcgacactgcggtctacgacaccatcgtgcgtatggcccagccgttctcgctgcgctac
ctgctggtcgacggccagggcaacttcggttcggtggacggcgacaacgccgcagccatg
cgatacaccgaagtgcgcatgaccaagctggcgcacgagctgctggccgacctgcacaag
gaaaccgtcgactgggtgcccaactacgacggcaccgagcagatcccggcagtcatgccg
acccgtattcccaacctgctggtcaacggttccagcggtatcgccgtgggcatggcgacc
aacattccgccacacaacctcggtgaagtcatcgacggctgcctggcgctgatcgacaat
ccggaagtcaccatcgatgaactgatgcagttcatccctgggccagacttcccgactgcc
ggcatcatcaacggtcgccaaggcatcatcgaggcctatcgtaccggtcgtggccgcatc
tacatgcgcgcccgctccgaaatcgaagacatcgacaaggtgggcggccgtcagcagatc
gtcgtcaccgagctgccgtaccagctgaacaaagcgcgcctgatcgaaaagatcgccgag
ctggtcaaagagaagaagatcgaaggcatcaccgagctgcgcgacgagtccgacaaggac
ggcatgcgcatcgtcatcgagctgcgtcgcggcgaggtgccggaggtggtgctcaacaac
ctctaccagcaaacccagctgcagagcgtgtttggcatcaacgtggtcgccctgatcgac
ggtcgtccgcgcctgctcaacctcaaggacctgctcgaagcgttcgtccgtcaccgccgt
gaagtggtgacccgccgcaccgtattcgagttgcgcaaggcccgtgagcgtggccacatc
cttgaaggccaggcggttgcgctgtccaacatcgacccggtcatcgccctgatcaaggct
tcgccgaccccgtccgaggccaaggaagccctggtttccacgccgtgggaatccagtgcc
gtgcaggtcatggtcgagcgcgccggcgccgattcctgccgccctgaagacctgcctgag
cagtacggcctgcatgagggcaagtacttcctgtcgccggagcaggcccaggccattctc
gacctgcgcctgcaccgcctgaccggcctggagcacgagaagctgctggccgagtaccag
gaaatcctcgagcagatcggcgagctgatccgcatcctcagcagcgccgagcgcctgatg
gaagtgatccgcgaagagctggaagccatccgtgccgagtacggcgatgtgcgccgcacc
gaaatcctcaatgccagccacgacctcaactacggcgacatgatcccggaagaagagcgc
gtggttaccatctcccacggtggttatgccaagacccagccattgtccgcttaccaggcc
cagcgccgtggcggcaaagggaagtcggcaaccggcgtgaaggacgaggactacatcgag
cacctgttggttgccaacagccatgccaccctgttgctgttctccagcaaaggcaaggtg
tactggaagaagacctacgaaatccccgaagcgtcccgcgctgcccgtggtcgcccgctg
gtcaacctgctgccgctggaggagggtgagcgcatcaccgccatgctgcagatcgacctc
gaagcgctgcagcagaacgccgacctcgacgaagaactggaagacgctgatgacaccgtg
ctcgagggtgagctggtagaggccgaggaagtcgacgaagaagacggcgacaccgcagaa
tgggtggcagagccgactggcgcttacatcttcatggccaccgcctccggtaccgtcaag
aagaccccgctggtgcagtttgcccgtccgcgctccaacggcctgatcgccttgaagctg
aaagaaggcgacaccctgattgcggcggccatcaccgacggcgccaaagaagtcatgatg
ttctccgacgccggcaaggtcatccgcttcgccgaaagcgtcgtgcgtgaaatgggccgt
acggcccgcggtgtgcgcggcatgaaactgggcaaaggccatcagatcatttcgatgctg
atcccggagtccggcgcgcagatcctcactgcctccgagcgtggcttcggcaagcgcacc
ccgctgtccaagttcccgcgtcgcggccgtggtggccagggcgtgatcgccatggggacc
aaggggcgcaacggtctgctggtcggtgctatccaggtgcaggaaggcgaggagatcatg
ctgatttccgaccagggcacgctggtgcgtacccgggttggcgaagtgtccagcctgagc
cgtaacacccagggtgttacgctgatcaagctggcggctgacgagaccctggtgggcctg
gagcgtatccaggagccgtccgaggacgaactcgatgatgtgatcgagacggacgaggag
ggcgtcgaggctgaagcgccggacaatgaagacgctgcgggtgccgaagaggccccgcag
gagtaa
DBGET
integrated database retrieval system
