Pseudomonas putida NBRC 14164: PP4_41490
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Entry
PP4_41490 CDS
T02707
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppun
Pseudomonas putida NBRC 14164
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppun03016
]
PP4_41490 (truD)
Enzymes [BR:
ppun01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PP4_41490 (truD)
Transfer RNA biogenesis [BR:
ppun03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PP4_41490 (truD)
Prokaryotic type
PP4_41490 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BAN56002
LinkDB
All DBs
Position
complement(4712985..4714043)
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AA seq
352 aa
AA seq
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MTELELLGPRASGEPLGTAVLKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA
RRLARAAGVPVRSISYAGLKDRQALTRQWFSLHLPGKADPDLSRAEDASLRVLKQVRHQR
KLQRGAHSANGFTLRLTALAADHQAVDARLAQLKQHGVPNYFGTQRFGHGGGNVHDALDW
AAREALPEQRNVRSRLLSAGRSYLFNQVLAARVAEGSWAQAQVGDLLAFTDSRSFFPAGE
AECADPRLAILDLHPTGPMWGEGDSPAGATTAQLENAVGARQPALCQWLAQAGMDHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVVVREVLDLVSAGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggaactgctgggcccgcgcgcatcgggcgaacccttgggcactgctgtc
ctcaaggcggtggctgaagacttccaggtcgatgaagtgctggacattccgctgtccggc
caaggcgagcacctgtggctgtgggtcgaaaagcgtgacctgaacaccgaagaggctgcc
cgccgcctggcgcgcgccgcaggcgtgccggtgcgttcgatcagctacgccgggctcaag
gaccgtcaggccctgacccggcagtggttcagcctgcacctgccgggcaaggccgacccg
gacctgtcgcgcgctgaagatgccagcctgcgcgtgctcaagcaggtgcgccaccagcgc
aagctgcagcgtggcgcgcattcggccaacggcttcaccctgcgcctgacggccctcgct
gccgaccaccaggctgtggatgcacgcctggcacagctcaagcagcacggtgtgcccaac
tatttcggcacccagcgcttcggtcacggcgggggcaacgtccatgacgccctcgactgg
gccgcgcgcgaggcattgcccgagcagcgcaacgtgcgttcgcggctgctttcggccggg
cgcagctacctgttcaaccaggtgctggcggcacgtgtcgccgaaggtagctgggcgcag
gcccaggtcggcgacctgctggcgttcaccgatagccgtagcttcttcccggctggtgag
gcggaatgcgccgacccacgcctggcgattctcgacctgcacccgaccggcccgatgtgg
ggcgagggcgactcgccagcaggcgccaccaccgcgcagctggaaaatgccgtcggcgca
cggcagccggcactttgccagtggttggcccaggcgggcatggatcacgaacggcgtatt
ttgcggctccctattggcggcctgacatggcattatcccgagcctgatatcctgcaactg
gaattcgtcctgccggccggatgcttcgccaccgtagtggtgcgcgaagtcttggatctg
gtgtcggcagggcagacggacagcccatgcgtattctga
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