Pseudomonas putida NBRC 14164: PP4_41880
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Entry
PP4_41880 CDS
T02707
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun00300
Lysine biosynthesis
ppun01100
Metabolic pathways
ppun01120
Microbial metabolism in diverse environments
ppun01230
Biosynthesis of amino acids
Module
ppun_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PP4_41880 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppun01002
]
PP4_41880 (dapE)
Enzymes [BR:
ppun01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PP4_41880 (dapE)
Peptidases and inhibitors [BR:
ppun01002
]
Metallo peptidases
Family M20
PP4_41880 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Glyco_transf_20
Motif
Other DBs
NCBI-ProteinID:
BAN56041
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Position
4758652..4759803
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AA seq
383 aa
AA seq
DB search
MTAPAELSPTLQLACDLIRRPSVTPVDADCQAQMMKRLGAVGFRLEPMRIEDVDNFWATH
GSQDGPVLCFAGHTDVVPTGPVQQWQHEPFEALIDADGMLCGRGAADMKGSLASMVIASE
RFVHDYPNHRGKVAFLITSDEEGPAHHGTKAVVERLKARNERLDWCIVGEPSSTTLLGDV
VKNGRRGSLGAKLTVRGKQGHVAYPHLARNPIHLAAPALAELAAEHWDEGNAFFPPTSFQ
ISNLNSGTGATNVVPGELTALFNFRFSTESTVEGLQARVSAILDKHELDWSIDWALSGLP
FLTEPGELLDAVAHSIKGVTGRDTQPSTSGGTSDGRFIATMGTQVVELGPVNATIHQVDE
RILASDLDLLTEIYYQTLVRLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccctgccgagctctcgcctacccttcaactggcctgcgacctgatccgtcgc
ccctcggtcacccctgtcgacgccgactgccaggcgcagatgatgaaacgcctgggcgcc
gtgggcttcaggctcgagccgatgcgcattgaagacgtagacaacttctgggccacccac
ggcagccaggacggcccggtgctgtgctttgccggccacaccgacgtggtgcccaccggc
ccggtgcagcaatggcagcacgaaccgttcgaagcactgatcgacgctgacggcatgctc
tgcggccgcggcgccgccgacatgaaaggcagcctggcctccatggtgatcgccagcgag
cgcttcgtgcacgactacccgaaccaccgcggcaaggtcgccttcctgatcaccagcgac
gaggaaggccctgcgcaccacggcaccaaggcagtggtcgagcgcctgaaagcacgcaac
gaacgcctggactggtgcatcgtaggcgaaccctccagcaccaccctcctgggtgacgtg
gtcaagaacggccgccgtggctcgctgggtgccaagctgaccgtgcgcggcaagcagggc
cacgtggcctacccgcacctggcacgtaacccgatccacctggccgccccggccttggcg
gaactggcagccgagcactgggacgaaggcaatgcgttcttcccgccaaccagcttccag
atctccaacctcaattccggcaccggcgccaccaacgtggtaccgggcgagctgaccgcg
ctgttcaacttccgcttctccaccgagtcgactgtcgaaggcctgcaggcgcgagtgtcg
gcgattctcgacaagcatgaactggactggtcgatcgactgggcgctgtctggcctgccg
ttcctcaccgaacctggtgaactgctcgacgccgtggcacacagcatcaagggcgtcacc
ggccgcgatacccagccatccaccagcggcggcacttccgatggccgtttcatcgccacc
atgggcacccaggtggtggagcttggcccggtcaacgccaccattcaccaggtggacgag
cggatcctggccagcgacctggacctgctgaccgaaatctactaccagactctggttcgg
ttgctcgcctga
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