Pseudomonas putida NBRC 14164: PP4_42160
Help
Entry
PP4_42160 CDS
T02707
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ppun
Pseudomonas putida NBRC 14164
Pathway
ppun00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PP4_42160 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppun01007
]
PP4_42160 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppun03016
]
PP4_42160 (lysS)
Enzymes [BR:
ppun01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PP4_42160 (lysS)
Amino acid related enzymes [BR:
ppun01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PP4_42160 (lysS)
Transfer RNA biogenesis [BR:
ppun03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PP4_42160 (lysS)
Prokaryotic type
Other AARSs
PP4_42160 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BAN56069
LinkDB
All DBs
Position
complement(4786059..4787561)
Genome browser
AA seq
500 aa
AA seq
DB search
MSDLKTDSQDLQQEENALIALRKEKLAAERAKGNAFPNDFRRDSYCNDLQKQYADKTKEE
LEAAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLSEETLAAVKTWDLGDIISAE
GTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLMVNEETRHTFR
VRSQVISHIRKFLTERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYNDNMDLTEELFRELAQLV
LGSTDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTAADLQDVDRARDIAKKAGAKVLGH
EGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARRNDDNPAVTDRFELFIGGREIAN
AYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctcaagaccgactcgcaagacctgcaacaggaagaaaatgccctgatcgcc
ctgcgcaaggaaaaacttgccgccgagcgcgccaaaggcaacgccttccccaacgacttc
cgtcgcgacagctactgcaacgacctgcagaaacagtacgcggacaagaccaaggaagag
ctggaagcagccgcgattccggtcaaggttgccggccgtatcatgctcaaccgtggctcg
ttcatggttatccaggacatgaccggtcgcatccaggtctacgtcaaccgcaagaccctg
tcggaagaaaccctggccgcagtcaagacctgggacctgggcgacatcatcagcgccgaa
ggcaccctggcacgttccggcaagggtgacctgtacgtcgaaatgaccaacgtgcgcctg
ctgaccaagtcgctgcgcccgctgcccgacaagcaccacggcctgaccgacaccgaacag
cgctaccgccagcgttacgtcgacctgatggtcaacgaagaaacccgccacaccttccgt
gtgcgttcgcaggtgatctcgcacattcgcaagttcctcaccgagcgtgacttcctcgaa
gtcgagacgccgatgctgcaaaccatcccgggcggcgcggcggccaagccgttcgaaacc
caccacaacgccctggacatggccatgttcctgcgtatcgcgccggagctgtacctcaag
cgcctggtggtgggcggctttgagaaagtgttcgagatcaaccgcaacttccgtaacgaa
ggtgtttcgacgcgtcataaccccgaattcaccatgctcgagttttaccaggcctacgcc
gactacaacgacaacatggacctcaccgaggaactgttccgcgagctggcgcagttggta
ctgggcagcaccgacgtgccttacggcgacaaggtgttccatttcggcgagccgttcgtg
cgcctgtcggtgttcgactcgatcctcaagtacaacccggaactgaccgctgccgacctg
caggacgttgaccgcgcccgcgacatcgccaagaaggccggtgccaaggtgctgggccac
gaaggcctgggcaagctgcaggtgatgattttcgaagagctggtcgagcacaagctggag
cagcctcacttcatcaccgagtacccgttcgaagtgtcgccgctggctcgtcgcaacgac
gacaacccggccgttaccgaccgcttcgagctgttcatcggtggccgcgaaatcgccaac
gcctactccgagctcaacgatgccgaagaccaggccgagcgcttcctggcccaggtggcc
gagaaggacgctggtgacgacgaagccatgcactacgacgccgacttcgtgcgtgcgctg
gagtacggcatgccgccgaccgccggtgaaggcatcggcatcgaccgcctggtcatgttg
ctgaccaactcgccgtcgatccgcgacgtgatcctgttcccgcacatgcgtccacaggcc
tga
DBGET
integrated database retrieval system
