Pseudomonas putida NBRC 14164: PP4_46900
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Entry
PP4_46900 CDS
T02707
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppun
Pseudomonas putida NBRC 14164
Brite
KEGG Orthology (KO) [BR:
ppun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppun03016
]
PP4_46900 (truB)
Enzymes [BR:
ppun01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PP4_46900 (truB)
Transfer RNA biogenesis [BR:
ppun03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PP4_46900 (truB)
Prokaryotic type
PP4_46900 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
BAN56543
UniProt:
A0ABM7ELL7
LinkDB
All DBs
Position
complement(5317823..5318740)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETVMQMGQTTNTGDAEGEVLQTREVTVGRADIEAVLPRFRGPIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTINRLELLECEGTRARLTVGCSKGTYI
RTLVEDIGEALGCGAYVAELRRTQAGPFALAQTVTLEALEQAHAEGGNEALDRFLMPSDS
GLQDWPMVSLSEHSAFYWLHGQAVRAPDAPQFGMVRVQDHNARFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgtatccgccgcaatgtcagcggcatcatcctgctcgacaagcct
ctgggcttcacgtccaacgccgccctgcaaaaggtgcgctggctgctcaacgcggaaaag
gccggtcacaccggtagcctcgacccgttggcaaccggcgtgctgccgctgtgcttcggc
gaggcgaccaagttttcgcagtacctgctcgattccgacaagggctacgaaaccgtcatg
cagatggggcagactaccaacaccggcgatgctgaaggtgaggtgctgcagacccgcgaa
gtgaccgttggtcgtgccgacatcgaagcggtgctgccacgttttcgtggcccgatcagc
cagataccgccgatgtactcggcgctcaagcgtgacggccagccgttgtacaagctggca
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattaaccgcttggagttg
ctggagtgcgaaggcactcgtgcacggttgaccgtaggatgcagcaaaggcacctatatc
cgcaccctggtggaggatatcggcgaggcccttggttgcggtgcctatgttgccgagttg
cgcaggacccaggccgggcccttcgcgctggcacaaacggtcacgctcgaagcgcttgaa
caggcccatgccgaaggcggtaacgaagcgctcgatcgcttcctgatgccctcggacagc
ggcctgcaggactggcccatggtgagcctgtccgagcacagcgcgttctactggctgcat
ggtcaggcggtacgcgcgccggacgcgccacaatttggcatggtccgggtacaggatcac
aatgcgcgcttcatcggtatcggtgaagtgagcgaagacgggcgtattgcgccgcgtcgg
ctgattcggtcggaatga
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