KEGG   Pseudomonas putida NBRC 14164: PP4_54290
Entry
PP4_54290         CDS       T02707                                 
Symbol
lpd
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ppun  Pseudomonas putida NBRC 14164
Pathway
ppun00010  Glycolysis / Gluconeogenesis
ppun00020  Citrate cycle (TCA cycle)
ppun00260  Glycine, serine and threonine metabolism
ppun00280  Valine, leucine and isoleucine degradation
ppun00310  Lysine degradation
ppun00380  Tryptophan metabolism
ppun00620  Pyruvate metabolism
ppun00630  Glyoxylate and dicarboxylate metabolism
ppun00640  Propanoate metabolism
ppun00670  One carbon pool by folate
ppun00785  Lipoic acid metabolism
ppun01100  Metabolic pathways
ppun01110  Biosynthesis of secondary metabolites
ppun01120  Microbial metabolism in diverse environments
ppun01200  Carbon metabolism
ppun01210  2-Oxocarboxylic acid metabolism
ppun01240  Biosynthesis of cofactors
Module
ppun_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ppun_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppun_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
ppun_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ppun_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ppun00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PP4_54290 (lpd)
   00020 Citrate cycle (TCA cycle)
    PP4_54290 (lpd)
   00620 Pyruvate metabolism
    PP4_54290 (lpd)
   00630 Glyoxylate and dicarboxylate metabolism
    PP4_54290 (lpd)
   00640 Propanoate metabolism
    PP4_54290 (lpd)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PP4_54290 (lpd)
   00280 Valine, leucine and isoleucine degradation
    PP4_54290 (lpd)
   00310 Lysine degradation
    PP4_54290 (lpd)
   00380 Tryptophan metabolism
    PP4_54290 (lpd)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PP4_54290 (lpd)
   00670 One carbon pool by folate
    PP4_54290 (lpd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppun04147]
    PP4_54290 (lpd)
Enzymes [BR:ppun01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PP4_54290 (lpd)
Exosome [BR:ppun04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PP4_54290 (lpd)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored HI0933_like Pyr_redox_3 NAD_binding_8 GIDA FAD_binding_2 AlaDh_PNT_C Lys_Orn_oxgnase FAD_binding_3 Thi4 Amino_oxidase Lycopene_cycl DAO 3HCDH_N
Other DBs
NCBI-ProteinID: BAN57282
UniProt: A0ABM7ENJ7
LinkDB
Position
6134617..6136017
AA seq 466 aa
MKSYDVVIIGGGPGGYNAAIRAGQLGLSVACVEGRSTLGGTCLNVGCMPSKALLHASELY
EAASGEEFAHLGIEVKPTLNLAQMMKQKDESVTGLTKGIEYLFRKNKVDWIKGWGRLDGV
GKVVVKAEDGSETALQAKDVVIATGSEPTPLPGVTIDNQRIIDSTGALSLPQVPKHLVVI
GAGVIGLELGSVWRRLGSQVTVIEYLDRICPGTDTETAKTLQKALAKQGMVFKLGSKVTQ
ATASADGVSLTLEPAAGGTAESLQADYVLVAIGRRPYTKGLNLESVGLETDKRGMLGNDH
HRTSVPGVWVIGDVTSGPMLAHKAEDEAVACIERIAGKPHEVNYNLIPGVIYTRPELATV
GKTEEQLKAEGRAYKVGKFPFTANSRAKINHETEGFAKVIADAQTDEVLGVHLVGPSVSE
MIGEFCVAMEFSASAEDIALTCHPHPTRSEALRQAAMNVDGMAMQI
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgaaatcctatgacgtggtgatcatcggcggtggccctggcggctacaacgcagccatc
cgcgctggccaactgggcctgagcgttgcctgcgtggaaggccgctcaaccttgggcggc
acttgtttgaacgtgggctgcatgccctccaaggcactgttgcatgcgtccgagctgtac
gaggccgccagcggtgaagagttcgcccacctcggtatcgaagtcaagcccaccctcaac
ctcgcccagatgatgaaacagaaggacgagagcgtgaccggcctgaccaagggaatcgaa
tacctgttccgcaagaacaaggtcgactggatcaagggttgggggcgcctggacggcgtc
ggcaaggttgtggtcaaggctgaagatggcagcgaaacggcgctgcaagccaaggacgtg
gtcatcgccaccggctccgagcctacccctctgccgggtgtgaccatcgacaaccagcgc
atcatcgactcgaccggcgcgctgtcgctgccgcaagtgcccaagcacctggtcgtcatc
ggtgccggcgtgatcggccttgagctgggttccgtctggcgccgcctgggcagccaggtc
accgttatcgaatacctcgatcgcatctgcccaggtaccgacacggaaactgccaagacc
ctgcaaaaggcactcgccaagcaaggcatggtgttcaagctgggtagcaaagtgacccaa
gccactgcaagtgccgatggcgtgagcctgacgctggagcccgctgccggcggcaccgca
gaatcgctgcaggccgattacgtgctggtggctatcggccgccgcccttataccaagggg
ctgaaccttgaaagcgtgggcctggaaaccgacaagcgcggcatgctcggcaacgaccac
caccgcacctcagtgcccggtgtgtgggtgattggtgacgtcacttccggcccgatgctg
gcgcacaaggccgaagacgaagcggtcgcctgcatcgagcgcattgccggcaagccccac
gaggtcaactacaacctcatccctggcgtgatctacacccgcccggagctggccaccgtg
ggcaagaccgaagagcagctcaaagccgaagggcgtgcttataaagtaggcaagttcccc
ttcaccgccaacagccgcgccaagatcaaccacgagaccgaaggcttcgccaaagtcatc
gccgatgcccaaaccgatgaagtgctgggtgtgcacctggtgggcccaagcgtcagcgag
atgatcggtgagttctgcgtggccatggagttctcggcctcggcagaagacatcgccctg
acctgccacccccacccgacccgctccgaggccttgcgccaggcagcgatgaatgtggac
ggcatggcgatgcagatctga

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