Pogoniulus pusillus (red-fronted tinkerbird): 135173294
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Entry
135173294 CDS
T10504
Symbol
XRCC4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
135173294 (XRCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppus03400
]
135173294 (XRCC4)
DNA repair and recombination proteins [BR:
ppus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
135173294 (XRCC4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4_C
XRCC4
XLF
ParD_antitoxin
DUF7383
Leu_zip
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
135173294
NCBI-ProteinID:
XP_063996162
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All DBs
Position
Z:32100967..32329899
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AA seq
334 aa
AA seq
DB search
MDKTLKRIHPVSDPGATYFLQVSWEKDIGTGFDIVLSDGQSAWTGTVSEAEISREAADME
MNREKYVEELKKALIAGEESAGKYNFAISRDDESMKCLFSYERNLKDGSFRLGSLKLQKV
SSAAEVIKELLSYCLDRLGRLQAKNEHLQKENERLLNEWSDVEKRLEKCVEAKEELEADL
YGRFVLVLNEKKAKIRNLQKLLSEAKESAAEAKCTRDNKGTTQMATGRENDYDGSTDEES
ENLTRASLPSGPEQRDSILGSPDVIETAPRRKRRQRTAKPAGTGAKVAAYEAELPDKEKP
DVTSEKASGKHSLDMMSLETLENTPEPEDLFDDI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggataagactttgaaaagaattcatccagtttctgatccaggagcaacatattttcta
caagtatcatgggaaaaagatataggcactggctttgacatagtacttagtgatggtcaa
agtgcatggactgggacagtatctgaagctgaaataagcagggaggctgctgacatggaa
atgaatagagaaaagtatgttgaagaactgaagaaagcattgatagctggagaagaatca
gctggcaaatataactttgctatttcaagagatgacgaaagtatgaaatgtctcttctcc
tatgaaagaaatctgaaagatggctcttttaggcttggatctctgaagctacagaaagtt
tcaagtgcagcagaagtgattaaggaactgcttagctactgtctggaccgcctggggaga
ttacaggcaaaaaatgagcatctgcaaaaagaaaatgaaaggcttttgaatgagtggagc
gatgtggagaagcggctggaaaaatgtgttgaagctaaagaggaactagaggcagatctt
tatggccgctttgttttggtgctgaatgaaaagaaagcaaagataagaaacttacagaag
ttactgagtgaagctaaagaatctgcagcagaagccaaatgtacaagggataataaaggt
accactcagatggctacagggagagaaaatgactatgatggcagtactgatgaggaaagt
gagaatttaacgcgggcctcattaccatcaggaccagaacaaagggattccattttgggt
agcccagatgtcattgaaaccgccccaagaagaaagcgaagacaaaggacagcaaagcct
gctggaacaggagctaaggtggctgcttatgaggcagaactgccagacaaggaaaaacct
gatgtgacctcagagaaggcatcgggcaagcattccctggatatgatgtctcttgaaaca
ctggaaaacactcctgagccagaagatctgtttgatgacatctag
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