Pogoniulus pusillus (red-fronted tinkerbird): 135173412
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Entry
135173412 CDS
T10504
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135173412 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppus03019
]
135173412 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
ppus03016
]
135173412 (ZCCHC7)
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
135173412 (ZCCHC7)
Transfer RNA biogenesis [BR:
ppus03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
135173412 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
135173412
NCBI-ProteinID:
XP_063996358
LinkDB
All DBs
Position
Z:41501678..41612321
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AA seq
559 aa
AA seq
DB search
MFFDHESIKDPEEYEDELYHEESSSEQSVDSEVEFHLYSQIHYSQNLGEASMQGSDEEES
TAGLRGCHPAPDEQCYKDEKATKTTSCATQTPDSPDVIVLSDGPEEDSIYVSKAKQPRRP
LAQDKIRAHPATSTPTHMEAAGYSPWGVAGSDVSKKRKDLSRQLSPVRPAGASAIQDVLV
IDSSEEESLVSESEHIESWMLLGAGADDKDEDIILNLEGCATPVSQGAPDVDWSISTKDL
EAQISNFGAMRRSAARYYTADKNVTCRNCARQGHLSKNCPVPKKVPPCCLCARRGHLQHN
CPARFCQNCFLPGHCFRDCLEKPFWNKLCNRCQMRGHYADACPEIWRQYHLTTHPGHIQE
AGPRRTPPSPAYCYNCSRRGHFGYECSEKRMHESMLPAYPFICCYDDKQEIRRRAYRLKR
KVEELQGAGLLPQQVSTPAQEGPSHSKRSKSWREHSKWQKDGKCHRKMAMSWEEEQHRSS
GLEEAFPRGLKRQAWKGSKSHQMSLFQALPGSWTVGPPAHREGARRKKKCRKKKDAGPDV
SDNLFLIKQRRKKSKEKSC
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgatcatgagagcatcaaggatcctgaggagtatgaagatgaactctaccac
gaggagtcatccagtgagcagagtgttgacagtgaggtggaatttcatctctacagccag
atccactactcccagaacctcggagaagccagtatgcagggaagtgacgaggaagaaagc
actgcagggctcaggggttgccatccagctccagatgagcaatgctacaaagatgagaag
gccaccaagaccaccagctgtgctactcagactccagatagccctgatgtcattgtcttg
tctgatggcccagaggaagacagcatttacgtaagcaaagcaaagcagcccagaaggcct
ctagctcaagataaaatacgtgcccatccagcaacttccaccccaactcacatggaggct
gcagggtacagcccctggggtgtcgctggatcagatgtttcaaagaaaaggaaagacctc
agcagacagctgagcccggtgcgtcctgctggagcttctgccatccaagatgtgttggtg
atagacagctcagaggaggagagcttggtgtctgaaagtgagcacatcgagagctggatg
ctgctgggagctggtgctgatgacaaggatgaagacatcatattaaaccttgagggctgt
gccactcctgtcagccaaggagcacctgatgtggactggtccatctctactaaagacttg
gaggcacagatctccaacttcggggccatgcggcgcagcgctgctcggtactacacagcc
gacaagaacgtcacctgcaggaactgtgccaggcagggccacctgtccaagaactgtcct
gtcccaaagaaggttcccccatgctgcctgtgtgccagaagaggtcacctccagcacaac
tgcccagcccgtttctgccagaactgcttcttgcctggccactgcttcagggactgcctg
gagaagcccttctggaacaagctctgcaatcgctgccagatgcgggggcattatgctgat
gcttgcccagaaatatggaggcagtatcacctaacaacccatccaggacacatccaggag
gcagggccccgacgcacaccgccatccccagcctattgctacaactgctcccgcaggggg
cacttcggatacgaatgctcagagaagaggatgcacgagagcatgctgccagcttacccc
ttcatctgctgctatgacgacaagcaggagatcaggagaagagcctacaggttgaagagg
aaggttgaagaactccagggagctggcctcctgccccagcaggtgtccacaccggcccag
gaggggcccagccacagcaagaggagcaagtcttggagggagcacagcaagtggcagaag
gatggcaagtgccacagaaagatggccatgtcctgggaagaggagcagcacagaagcagt
ggtctggaggaggccttccccagagggctgaagaggcaggcatggaagggcagcaaaagc
caccagatgtccctgttccaggcactcccaggcagctggaccgtgggcccaccagcgcat
cgggagggtgccaggagaaagaagaagtgcagaaagaagaaggatgctggtcctgacgtc
agtgataacctgttcctcataaagcagagaaggaagaagtccaaggagaagtcttgttga
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