Pogoniulus pusillus (red-fronted tinkerbird): 135173598
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Entry
135173598 CDS
T10504
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ppus Pogoniulus pusillus (red-fronted tinkerbird)
Pathway
ppus03013
Nucleocytoplasmic transport
ppus03015
mRNA surveillance pathway
ppus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135173598 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
135173598 (NCBP1)
03015 mRNA surveillance pathway
135173598 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppus03019
]
135173598 (NCBP1)
03041 Spliceosome [BR:
ppus03041
]
135173598 (NCBP1)
Messenger RNA biogenesis [BR:
ppus03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
135173598 (NCBP1)
Spliceosome [BR:
ppus03041
]
Common components
Common spliceosomal components
Cap binding complex
135173598 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Importin_rep_6
C24B10_03
Vfa1
Motif
Other DBs
NCBI-GeneID:
135173598
NCBI-ProteinID:
XP_063996673
LinkDB
All DBs
Position
Z:90240492..90276195
Genome browser
AA seq
794 aa
AA seq
DB search
MSRRRHSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMY
NEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYVFAFLSSLPWVG
KELYEKKDAEMDRLLSQTESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQKLKK
DRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAELFQ
LPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSPANP
VCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDDEGFTFNP
LKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHKELEE
TKARLARQHKRRDSDDDDDDDDRSSDREDGPLEEQIERLQEKVETAQSEQKNLFLVIFQR
FIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDH
HILAVFQQFCALQA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcgacacagcgacgacagcgacgggcagcctcacaagagacggaggacg
tccgagccgtcggagatcgaggagagacttgagtcgctgatctgcagggtgggagagaag
agcaattcatctttggagagcaacttggagggactagctggtgttttggaagctgatctg
ccaaattataaaagcaagatactaagaatactatgtactgttgcacgtctgctaccagag
aagcttacggtttacactacgctggttgggctgctgaatgcccggaactacaattttggt
ggggaatttgtagaagccatgattcgccagcttaaagaatgtctgaaagtcaatatgtat
aacgaggctgtgcatttagttcgttttctgtctgaccttgtgaattgtcatgtgatagct
gcaccttcaatggtagctatgtttgagaactttgtgagcgtgacacaggaggaagatgta
ccccaagtacgatgtgattggtatgtgtttgcatttctgtcatctttgccttgggttggg
aaggagctgtatgagaagaaggatgctgaaatggatcgtctcttgtcacaaacagaaagc
tatttgaagcgccgccagaaaattcatgtccccatgctgcaagtctggactgctgataaa
ccacatccacaagaagaatatttagactgcctttggtctcagattcagaagctgaagaag
gatcgttggcaagagcgacacatcttgaggccttacttggcttttgacagcattctttgt
gaagcccttcaacacaatctgcctcccttcactccaccacctcatactgaggattctgtg
tatccaatgccaagagttatttttaggatgtttgactacacagatgaccccgagggacct
gtcatgcctggcagccactctgttgaacgatttgtgatagaagagaatcttcactgcatc
atcaaatcccactggaaagagagaaagacttgtgctgcacagctgttgagctatccagga
aataacaagatccctttgaactaccacatagtagaggtgatatttgcagaactgtttcag
cttccatctccaccacacattgaagtcatgtacacaacactgctgattgaactgtgcaaa
cttcagcctggctcattaccacaagttcttgcacaagccacagaaatgctctacatgcgt
ttggatacaatgaatacaacatgtgtggacagatttattaactggttttctcaccacttg
agcaacttccaattccgttggagctgggaagattggtcagattgtcttactcaggacctt
gaaaagcccaaacccaaatttgtgagagaggttctggagaagtgcatgcgactttcctat
catcagcgaataatagacattgttcctgcaagtttttctgtcctcagccctgctaatcca
gtatgcatttacaaatacggagatgaaagtaacaggtctcttcctggatatactgtggca
ctctgtttaacaattgcaattaaaaataaggccagtaacgatgaaatcttcagcatttta
aaagatgtgcctaatccaaaccaggatgatgatgatgatgaaggatttaccttcaaccct
ctgaaaatagaagtctttgttcaaactctgctccatctagctgccaagtctttcagccac
tccttcagcgccctggcaaagtttcatgaagtcttcaaaacacttgctgaaagtgacgag
gggaagctccatgtcctaagggttgtgtatgaggtttggaagaaccatccacagatgatt
gctgtgcttgtggacaagatgattcggacacaaattgttgactgtgctgcagtagcaaac
tggatcttttcttcagagcttgcccatgattttactaggttttatatctgggaaatcttg
cattccacaattcgtaagatgaataagcatgttctgaagattcataaagagctggaggag
actaaggcaaggctggccaggcagcacaaaaggcgagatagtgatgatgatgatgatgat
gatgaccgaagcagtgatcgggaggatggacccctggaagagcagatagagcgcttgcag
gagaaggtggagacagcccagagtgagcagaagaatctcttccttgttatattccagcgt
ttcataatgctgttaactgagcacttagtgcgctgcgagactggtgggattgatgtattc
acaccttggtacaagagctgtatagaaaggttgcagcagatcttcctgcagcatcaccag
ataatccagcagtacatggtaaccctggagaacctcctgtttacagctgaacttgaccac
cacatactggctgtgtttcagcagttctgtgctctgcaggcttga
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